RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 ZNF543Q08ER8 600 aa25.4■■□□□ 1.66
ECHDC3-205ENST00000496136 CUL4AQ13619 759 aa25.4■■□□□ 1.66
ECHDC3-205ENST00000496136 SH3D19Q5HYK7 790 aa25.4■■□□□ 1.66
ECHDC3-205ENST00000496136 LPAR1Q92633 364 aa25.4■■□□□ 1.66
ECHDC3-205ENST00000496136 PTPRFP10586 1907 aa25.4■■□□□ 1.66
ECHDC3-205ENST00000496136 CCDC196A0A1B0GTZ2 297 aa25.39■■□□□ 1.66
ECHDC3-205ENST00000496136 WNK4Q96J92 1243 aa25.39■■□□□ 1.66
ECHDC3-205ENST00000496136 NUP88Q99567 741 aaPredicted RBP25.39■■□□□ 1.66
ECHDC3-205ENST00000496136 RBM28Q9NW13 759 aaKnown RBP25.39■■□□□ 1.66
ECHDC3-205ENST00000496136 ABT1Q9ULW3 272 aaKnown RBP25.39■■□□□ 1.66
ECHDC3-205ENST00000496136 FRMPD2Q68DX3 1309 aaPredicted RBP25.39■■□□□ 1.65
ECHDC3-205ENST00000496136 DHX16O60231 1041 aaKnown RBP25.39■■□□□ 1.65
ECHDC3-205ENST00000496136 ZNF157P51786 506 aaPredicted RBP25.39■■□□□ 1.65
ECHDC3-205ENST00000496136 RGMBQ6NW40 437 aa25.39■■□□□ 1.65
ECHDC3-205ENST00000496136 KCTD1Q719H9 257 aa25.39■■□□□ 1.65
ECHDC3-205ENST00000496136 C12orf42Q96LP6 360 aa25.39■■□□□ 1.65
ECHDC3-205ENST00000496136 BAZ2BQ9UIF8 2168 aaKnown RBP25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 KLRF2D3W0D1 207 aa25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 BMP3P12645 472 aa25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 NTRK3Q16288 839 aa25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 ASPRV1Q53RT3 343 aa25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 GPATCH4Q5T3I0 446 aaKnown RBP25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 SPRYD7Q5W111 196 aa25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 CMTR1Q8N1G2 835 aaKnown RBP25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 GPCPD1Q9NPB8 672 aa25.38■■□□□ 1.65
ECHDC3-205ENST00000496136 A0A0G2JLL6 359 aaPredicted RBP25.37■■□□□ 1.65
ECHDC3-205ENST00000496136 SLC4A3P48751 1232 aa25.37■■□□□ 1.65
ECHDC3-205ENST00000496136 CCDC96Q2M329 555 aa25.37■■□□□ 1.65
ECHDC3-205ENST00000496136 PRRT2Q7Z6L0 340 aaPredicted RBP25.37■■□□□ 1.65
ECHDC3-205ENST00000496136 CPLX1O14810 134 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 PLEKHA8P1O95397 391 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 CTDNEP1O95476 244 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 ZBTB48P10074 688 aaPredicted RBP25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 VCAM1P19320 739 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 APLP1P51693 650 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 FAM83BQ5T0W9 1011 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 TTBK2Q6IQ55 1244 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 NBPF11Q86T75 865 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 SRBD1Q8N5C6 995 aaKnown RBP25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 TMOD4Q9NZQ9 345 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 DTNBO60941 627 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 GNAQP50148 359 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 TMTC3Q6ZXV5 915 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 CCDC82Q8N4S0 544 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 HHIPL1Q96JK4 782 aa25.36■■□□□ 1.65
ECHDC3-205ENST00000496136 WDR46O15213 610 aaKnown RBP25.35■■□□□ 1.65
ECHDC3-205ENST00000496136 MKRN3Q13064 507 aaKnown RBP25.35■■□□□ 1.65
ECHDC3-205ENST00000496136 SNAPC2Q13487 334 aa25.35■■□□□ 1.65
ECHDC3-205ENST00000496136 UBA5Q9GZZ9 404 aa25.35■■□□□ 1.65
ECHDC3-205ENST00000496136 CPVLQ9H3G5 476 aa25.35■■□□□ 1.65
ECHDC3-205ENST00000496136 ISY1Q9ULR0 285 aaKnown RBP25.35■■□□□ 1.65
ECHDC3-205ENST00000496136 TMEM232C9JQI7 657 aa25.34■■□□□ 1.65
ECHDC3-205ENST00000496136 FUT2Q10981 343 aa25.34■■□□□ 1.65
ECHDC3-205ENST00000496136 RASAL3Q86YV0 1011 aa25.34■■□□□ 1.65
ECHDC3-205ENST00000496136 MS4A4AQ96JQ5 239 aa25.34■■□□□ 1.65
ECHDC3-205ENST00000496136 LZTS2Q9BRK4 669 aa25.34■■□□□ 1.65
ECHDC3-205ENST00000496136 CREBZFQ9NS37 354 aa25.34■■□□□ 1.65
ECHDC3-205ENST00000496136 PPFIA3O75145 1194 aa25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 IFNAR1P17181 557 aa25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 SLC35G1Q2M3R5 365 aa25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 CPLX2Q6PUV4 134 aaKnown RBP25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 PROCA1Q8NCQ7 364 aaPredicted RBP25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 INTS4Q96HW7 963 aaKnown RBP25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 LLPHQ9BRT6 129 aaKnown RBP25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 CYTH3O43739 400 aa25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 SMARCA1P28370 1054 aa25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 SLC16A2P36021 539 aa25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 MOGSQ13724 837 aa25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 NSUN7Q8NE18 718 aaKnown RBP25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 RPAP3Q9H6T3 665 aaPredicted RBP25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.33■■□□□ 1.65
ECHDC3-205ENST00000496136 HSP90AA1P07900 732 aaKnown RBP25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 GTF2A2P52657 109 aa25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 BTNL9Q6UXG8 535 aa25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 GADL1Q6ZQY3 521 aa25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 FASTKD5Q7L8L6 764 aaKnown RBP25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 SPRYD3Q8NCJ5 442 aa25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 PHKBQ93100 1093 aa25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 FOXD4L1Q9NU39 408 aa25.32■■□□□ 1.64
ECHDC3-205ENST00000496136 STAT2P52630 851 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 CCDC102AQ96A19 550 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 IPO9Q96P70 1041 aaKnown RBP25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 RIOX1Q9H6W3 641 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 FEM1BQ9UK73 627 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 FAM155AB1AL88 458 aaPredicted RBP25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 JAK2O60674 1132 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 PLA2G6O60733 806 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 CDKL5O76039 1030 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 SLC10A3P09131 477 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 TREML2Q5T2D2 321 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 SMARCC2Q8TAQ2 1214 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 CHURC1Q8WUH1 139 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 SPZ1Q9BXG8 430 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 TANGO6Q9C0B7 1094 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 FBXO28Q9NVF7 368 aa25.31■■□□□ 1.64
ECHDC3-205ENST00000496136 CETPP11597 493 aa25.3■■□□□ 1.64
ECHDC3-205ENST00000496136 ADGRF4Q8IZF3 695 aa25.3■■□□□ 1.64
ECHDC3-205ENST00000496136 VAT1LQ9HCJ6 419 aa25.3■■□□□ 1.64
ECHDC3-205ENST00000496136 LOC285556D6RIA3 1793 aa25.29■■□□□ 1.64
ECHDC3-205ENST00000496136 PTPDC1A2A3K4 754 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms