RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 MTMR4Q9NYA4 1195 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 SUPT16HQ9Y5B9 1047 aaKnown RBP28.83■■■□□ 2.21
HLA-C-209ENST00000495835 CACNB2Q08289 660 aaPredicted RBP28.82■■■□□ 2.2
HLA-C-209ENST00000495835 MCMDC2Q4G0Z9 681 aa28.82■■■□□ 2.2
HLA-C-209ENST00000495835 B4GALNT3Q6L9W6 998 aa28.82■■■□□ 2.2
HLA-C-209ENST00000495835 ANAPC4Q9UJX5 808 aa28.82■■■□□ 2.2
HLA-C-209ENST00000495835 PPP1R9AQ9ULJ8 1098 aa28.82■■■□□ 2.2
HLA-C-209ENST00000495835 MYH4Q9Y623 1939 aa28.82■■■□□ 2.2
HLA-C-209ENST00000495835 F5H6K3 240 aa28.81■■■□□ 2.2
HLA-C-209ENST00000495835 TTLL1O95922 423 aa28.81■■■□□ 2.2
HLA-C-209ENST00000495835 ERCC3P19447 782 aa28.81■■■□□ 2.2
HLA-C-209ENST00000495835 KLRC3Q07444 240 aa28.81■■■□□ 2.2
HLA-C-209ENST00000495835 MFSD14CQ5VZR4 134 aa28.81■■■□□ 2.2
HLA-C-209ENST00000495835 SLC5A4Q9NY91 659 aa28.81■■■□□ 2.2
HLA-C-209ENST00000495835 CLIP2Q9UDT6 1046 aa28.81■■■□□ 2.2
HLA-C-209ENST00000495835 FOXP2O15409 715 aa28.8■■■□□ 2.2
HLA-C-209ENST00000495835 PRDM1O75626 825 aa28.8■■■□□ 2.2
HLA-C-209ENST00000495835 TSPY3P0CV98 308 aa28.8■■■□□ 2.2
HLA-C-209ENST00000495835 TSPY8P0CW00 308 aa28.8■■■□□ 2.2
HLA-C-209ENST00000495835 CCL14Q16627 93 aa28.8■■■□□ 2.2
HLA-C-209ENST00000495835 PLEKHM2Q8IWE5 1019 aa28.8■■■□□ 2.2
HLA-C-209ENST00000495835 OGDHLQ9ULD0 1010 aa28.8■■■□□ 2.2
HLA-C-209ENST00000495835 TRIM6-TRIM34B2RNG4 842 aa28.79■■■□□ 2.2
HLA-C-209ENST00000495835 COPB2P35606 906 aa28.79■■■□□ 2.2
HLA-C-209ENST00000495835 FAM83BQ5T0W9 1011 aa28.79■■■□□ 2.2
HLA-C-209ENST00000495835 CCDC129Q6ZRS4 1044 aa28.79■■■□□ 2.2
HLA-C-209ENST00000495835 CEP95Q96GE4 821 aa28.79■■■□□ 2.2
HLA-C-209ENST00000495835 COL11A1P12107 1806 aaPredicted RBP28.78■■■□□ 2.2
HLA-C-209ENST00000495835 VWA5AO00534 786 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 RAD21O60216 631 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 PLS1Q14651 629 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 TMEM132BQ14DG7 1078 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 NECAB2Q7Z6G3 386 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 DPP9Q86TI2 863 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 RIOX2Q8IUF8 465 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 PRPF38AQ8NAV1 312 aaKnown RBP28.78■■■□□ 2.2
HLA-C-209ENST00000495835 GMCL1P1Q8NEA9 526 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 DPF3Q92784 378 aa28.78■■■□□ 2.2
HLA-C-209ENST00000495835 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.78■■■□□ 2.2
HLA-C-209ENST00000495835 ZMYM6O95789 1325 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 NDUFB10O96000 172 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 IGHA2P01877 340 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 ADORA2AP29274 412 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 MFAP1P55081 439 aaKnown RBP28.77■■■□□ 2.2
HLA-C-209ENST00000495835 TFAP4Q01664 338 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 OLFML2BQ68BL8 750 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 NCAPG2Q86XI2 1143 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 SLF1Q9BQI6 1058 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 FBXO28Q9NVF7 368 aa28.77■■■□□ 2.2
HLA-C-209ENST00000495835 STAT3P40763 770 aa28.76■■■□□ 2.19
HLA-C-209ENST00000495835 NPLOC4Q8TAT6 608 aa28.76■■■□□ 2.19
HLA-C-209ENST00000495835 RILPL2Q969X0 211 aa28.76■■■□□ 2.19
HLA-C-209ENST00000495835 FAM227BQ96M60 508 aa28.76■■■□□ 2.19
HLA-C-209ENST00000495835 NR2E3Q9Y5X4 410 aa28.76■■■□□ 2.19
HLA-C-209ENST00000495835 A0A0D9SFI3 127 aa28.75■■■□□ 2.19
HLA-C-209ENST00000495835 FGRP09769 529 aa28.75■■■□□ 2.19
HLA-C-209ENST00000495835 FCER1AP12319 257 aa28.75■■■□□ 2.19
HLA-C-209ENST00000495835 VPS53Q5VIR6 699 aa28.75■■■□□ 2.19
HLA-C-209ENST00000495835 PAWRQ96IZ0 340 aaKnown RBP28.75■■■□□ 2.19
HLA-C-209ENST00000495835 FLRT1Q9NZU1 646 aa28.75■■■□□ 2.19
HLA-C-209ENST00000495835 ZNF214Q9UL59 606 aaPredicted RBP28.75■■■□□ 2.19
HLA-C-209ENST00000495835 ZNFX1Q9P2E3 1918 aaKnown RBP28.75■■■□□ 2.19
HLA-C-209ENST00000495835 MSCO60682 206 aa28.74■■■□□ 2.19
HLA-C-209ENST00000495835 FGAP02671 866 aa28.74■■■□□ 2.19
HLA-C-209ENST00000495835 REPS2Q8NFH8 660 aa28.74■■■□□ 2.19
HLA-C-209ENST00000495835 NBPF3Q9H094 633 aa28.74■■■□□ 2.19
HLA-C-209ENST00000495835 FEM1BQ9UK73 627 aa28.74■■■□□ 2.19
HLA-C-209ENST00000495835 HIP1O00291 1037 aa28.73■■■□□ 2.19
HLA-C-209ENST00000495835 ATP2A1O14983 1001 aa28.73■■■□□ 2.19
HLA-C-209ENST00000495835 ORC4O43929 436 aa28.73■■■□□ 2.19
HLA-C-209ENST00000495835 FDX1P10109 184 aa28.73■■■□□ 2.19
HLA-C-209ENST00000495835 HSPD1P10809 573 aaKnown RBP28.73■■■□□ 2.19
HLA-C-209ENST00000495835 SDSP20132 328 aa28.73■■■□□ 2.19
HLA-C-209ENST00000495835 NMIQ13287 307 aaPredicted RBP28.73■■■□□ 2.19
HLA-C-209ENST00000495835 FAM47AQ5JRC9 791 aa28.73■■■□□ 2.19
HLA-C-209ENST00000495835 LHX8Q68G74 356 aa28.73■■■□□ 2.19
HLA-C-209ENST00000495835 SAMD1Q6SPF0 538 aaPredicted RBP28.73■■■□□ 2.19
HLA-C-209ENST00000495835 CCDC171Q6TFL3 1326 aa28.72■■■□□ 2.19
HLA-C-209ENST00000495835 TSPY2A6NKD2 308 aa28.72■■■□□ 2.19
HLA-C-209ENST00000495835 CCND3P30281 292 aaPredicted RBP28.72■■■□□ 2.19
HLA-C-209ENST00000495835 CTDSPL2Q05D32 466 aa28.72■■■□□ 2.19
HLA-C-209ENST00000495835 CEP290O15078 2479 aa28.71■■■□□ 2.19
HLA-C-209ENST00000495835 H0YGN5 161 aa28.71■■■□□ 2.19
HLA-C-209ENST00000495835 COBLO75128 1261 aa28.71■■■□□ 2.19
HLA-C-209ENST00000495835 PCP11498 1178 aaKnown RBP28.71■■■□□ 2.19
HLA-C-209ENST00000495835 GMCL1Q96IK5 515 aa28.71■■■□□ 2.19
HLA-C-209ENST00000495835 NUP88Q99567 741 aaPredicted RBP28.71■■■□□ 2.19
HLA-C-209ENST00000495835 TEX13BQ9BXU2 312 aa28.71■■■□□ 2.19
HLA-C-209ENST00000495835 DIS3Q9Y2L1 958 aaKnown RBP28.71■■■□□ 2.19
HLA-C-209ENST00000495835 ZBED4O75132 1171 aa28.7■■■□□ 2.18
HLA-C-209ENST00000495835 BMP3P12645 472 aa28.7■■■□□ 2.18
HLA-C-209ENST00000495835 NOVP48745 357 aa28.7■■■□□ 2.18
HLA-C-209ENST00000495835 MNX1P50219 401 aaPredicted RBP28.7■■■□□ 2.18
HLA-C-209ENST00000495835 SLFN13Q68D06 897 aa28.7■■■□□ 2.18
HLA-C-209ENST00000495835 SLC34A2O95436 690 aa28.69■■■□□ 2.18
HLA-C-209ENST00000495835 NT5C2P49902 561 aa28.69■■■□□ 2.18
HLA-C-209ENST00000495835 KCTD2Q14681 263 aa28.69■■■□□ 2.18
HLA-C-209ENST00000495835 ZNF589Q86UQ0 364 aaPredicted RBP28.69■■■□□ 2.18
HLA-C-209ENST00000495835 MMP19Q99542 508 aa28.69■■■□□ 2.18
HLA-C-209ENST00000495835 EVI5O60447 810 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms