RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 FRMPD2Q68DX3 1309 aaPredicted RBP28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 SCAF8Q9UPN6 1271 aaKnown RBP28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 GLTPD2A6NH11 291 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 U2AF2P26368 475 aaKnown RBP eCLIP28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 SUPT20HL1Q3ZLR7 823 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 USP50Q70EL3 339 aaPredicted RBP28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 USP48Q86UV5 1035 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 SIAH1Q8IUQ4 282 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 CCDC148Q8NFR7 591 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 DCPSQ96C86 337 aaKnown RBP28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 GMCL1Q96IK5 515 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 PHF20Q9BVI0 1012 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 RIOX1Q9H6W3 641 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 GOPCQ9HD26 462 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 VPS54Q9P1Q0 977 aa28.13■■■□□ 2.09
PPP1R3F-205ENST00000495799 ELP1O95163 1332 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 hCG_1642624A0A1W2PR95 340 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 PHF20L1A8MW92 1017 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 hCG_1984214I3L0E3 225 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 CYTH3O43739 400 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 CTNND1O60716 968 aaKnown RBP28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 MBD3O95983 291 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 CALML3P27482 149 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 SLC1A4P43007 532 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 JAG1P78504 1218 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 NBPF12Q5TAG4 269 aaPredicted RBP28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 FAM173BQ6P4H8 233 aa28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 DIS3L2Q8IYB7 885 aaKnown RBP28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 ZNF713Q8N859 430 aaPredicted RBP28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 CCDC12Q8WUD4 166 aaPredicted RBP28.12■■■□□ 2.09
PPP1R3F-205ENST00000495799 F5H6K3 240 aa28.11■■■□□ 2.09
PPP1R3F-205ENST00000495799 KLRC3Q07444 240 aa28.11■■■□□ 2.09
PPP1R3F-205ENST00000495799 GPCPD1Q9NPB8 672 aa28.11■■■□□ 2.09
PPP1R3F-205ENST00000495799 KCNJ14Q9UNX9 436 aa28.11■■■□□ 2.09
PPP1R3F-205ENST00000495799 TMX2Q9Y320 296 aa28.11■■■□□ 2.09
PPP1R3F-205ENST00000495799 DDX49Q9Y6V7 483 aaKnown RBP28.11■■■□□ 2.09
PPP1R3F-205ENST00000495799 SCN4AP35499 1836 aa28.11■■■□□ 2.09
PPP1R3F-205ENST00000495799 IQCA1LA6NCM1 817 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 RAD21O60216 631 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 KRT2P35908 639 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 MYSM1Q5VVJ2 828 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 RASGRP2Q7LDG7 609 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 PIBF1Q8WXW3 757 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 SPATA32Q96LK8 384 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 GDPD2Q9HCC8 539 aa28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 ISY1Q9ULR0 285 aaKnown RBP28.1■■■□□ 2.09
PPP1R3F-205ENST00000495799 KIF28PB7ZC32 967 aa28.09■■■□□ 2.09
PPP1R3F-205ENST00000495799 NLRP5P59047 1200 aa28.09■■■□□ 2.09
PPP1R3F-205ENST00000495799 SULF1Q8IWU6 871 aa28.09■■■□□ 2.09
PPP1R3F-205ENST00000495799 NDUFB10O96000 172 aa28.08■■■□□ 2.09
PPP1R3F-205ENST00000495799 KLHL40Q2TBA0 621 aa28.08■■■□□ 2.09
PPP1R3F-205ENST00000495799 GALNT17Q6IS24 598 aa28.08■■■□□ 2.09
PPP1R3F-205ENST00000495799 NOSTRINQ8IVI9 506 aa28.08■■■□□ 2.09
PPP1R3F-205ENST00000495799 ZC3H15Q8WU90 426 aaKnown RBP28.08■■■□□ 2.09
PPP1R3F-205ENST00000495799 BARHL2Q9NY43 387 aa28.08■■■□□ 2.09
PPP1R3F-205ENST00000495799 DOCK1Q14185 1865 aa28.08■■■□□ 2.09
PPP1R3F-205ENST00000495799 EPHX2P34913 555 aa28.08■■■□□ 2.08
PPP1R3F-205ENST00000495799 UBE2HP62256 183 aa28.08■■■□□ 2.08
PPP1R3F-205ENST00000495799 SLC35G1Q2M3R5 365 aa28.08■■■□□ 2.08
PPP1R3F-205ENST00000495799 UBA5Q9GZZ9 404 aa28.08■■■□□ 2.08
PPP1R3F-205ENST00000495799 TFIP11Q9UBB9 837 aaKnown RBP28.08■■■□□ 2.08
PPP1R3F-205ENST00000495799 BMP3P12645 472 aa28.07■■■□□ 2.08
PPP1R3F-205ENST00000495799 KCTD1Q719H9 257 aa28.07■■■□□ 2.08
PPP1R3F-205ENST00000495799 HEATR3Q7Z4Q2 680 aa28.07■■■□□ 2.08
PPP1R3F-205ENST00000495799 ZNF112Q9UJU3 913 aa28.07■■■□□ 2.08
PPP1R3F-205ENST00000495799 A0A1W2PRG0 241 aa28.06■■■□□ 2.08
PPP1R3F-205ENST00000495799 BTBD18B2RXH4 712 aa28.06■■■□□ 2.08
PPP1R3F-205ENST00000495799 HOMER1Q86YM7 354 aa28.06■■■□□ 2.08
PPP1R3F-205ENST00000495799 LEO1Q8WVC0 666 aaPredicted RBP28.06■■■□□ 2.08
PPP1R3F-205ENST00000495799 VAT1LQ9HCJ6 419 aa28.06■■■□□ 2.08
PPP1R3F-205ENST00000495799 WWC2Q6AWC2 1192 aa28.05■■■□□ 2.08
PPP1R3F-205ENST00000495799 PIGSQ96S52 555 aa28.05■■■□□ 2.08
PPP1R3F-205ENST00000495799 CPVLQ9H3G5 476 aa28.05■■■□□ 2.08
PPP1R3F-205ENST00000495799 POLR3EQ9NVU0 708 aa28.05■■■□□ 2.08
PPP1R3F-205ENST00000495799 RTEL1Q9NZ71 1219 aa28.05■■■□□ 2.08
PPP1R3F-205ENST00000495799 BAZ2BQ9UIF8 2168 aaKnown RBP28.04■■■□□ 2.08
PPP1R3F-205ENST00000495799 WDR90Q96KV7 1748 aa28.04■■■□□ 2.08
PPP1R3F-205ENST00000495799 SCYL3Q8IZE3 742 aa28.04■■■□□ 2.08
PPP1R3F-205ENST00000495799 ADGRF4Q8IZF3 695 aa28.04■■■□□ 2.08
PPP1R3F-205ENST00000495799 GPKOWQ92917 476 aaPredicted RBP eCLIP28.04■■■□□ 2.08
PPP1R3F-205ENST00000495799 USP28Q96RU2 1077 aa28.04■■■□□ 2.08
PPP1R3F-205ENST00000495799 VCPKMTQ9H867 229 aa28.04■■■□□ 2.08
PPP1R3F-205ENST00000495799 PNMA6FA0A0J9YX94 578 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 STXBP3O00186 592 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 YEATS4O95619 227 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 ECE1P42892 770 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 RILPL1Q5EBL4 403 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 ACER1Q8TDN7 264 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 WRNIP1Q96S55 665 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 JMJD4Q9H9V9 463 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 AS3MTQ9HBK9 375 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 RCOR1Q9UKL0 485 aa28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 POLR2AP24928 1970 aaKnown RBP28.03■■■□□ 2.08
PPP1R3F-205ENST00000495799 GOLGA6L4A6NEF3 574 aa28.02■■■□□ 2.08
PPP1R3F-205ENST00000495799 NAPAP54920 295 aa28.02■■■□□ 2.08
PPP1R3F-205ENST00000495799 TTBK2Q6IQ55 1244 aa28.02■■■□□ 2.08
PPP1R3F-205ENST00000495799 PPP1R18Q6NYC8 613 aa28.02■■■□□ 2.08
PPP1R3F-205ENST00000495799 DAGLBQ8NCG7 672 aa28.02■■■□□ 2.08
PPP1R3F-205ENST00000495799 SHISA4Q96DD7 197 aa28.02■■■□□ 2.08
PPP1R3F-205ENST00000495799 FEZ1Q99689 392 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms