RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 SLC25A27O95847 323 aa22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 FCER1AP12319 257 aa22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 CYBAP13498 195 aa22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 RASA1P20936 1047 aa22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 TRPV1Q8NER1 839 aa22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 GDF15Q99988 308 aa22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.02■■□□□ 1.12
CLCNKA-207ENST00000495784 ROBO3Q96MS0 1386 aa22.01■■□□□ 1.11
CLCNKA-207ENST00000495784 M0R2C6 588 aa22.01■■□□□ 1.11
CLCNKA-207ENST00000495784 IGHA2P01877 340 aa22.01■■□□□ 1.11
CLCNKA-207ENST00000495784 FAM83BQ5T0W9 1011 aa22.01■■□□□ 1.11
CLCNKA-207ENST00000495784 ZNF287Q9HBT7 754 aa22.01■■□□□ 1.11
CLCNKA-207ENST00000495784 PPP1R9AQ9ULJ8 1098 aa22.01■■□□□ 1.11
CLCNKA-207ENST00000495784 ADAMTS5Q9UNA0 930 aa22.01■■□□□ 1.11
CLCNKA-207ENST00000495784 BMP8BP34820 402 aa22■■□□□ 1.11
CLCNKA-207ENST00000495784 LRRC26Q2I0M4 334 aa22■■□□□ 1.11
CLCNKA-207ENST00000495784 FSD1Q9BTV5 496 aa22■■□□□ 1.11
CLCNKA-207ENST00000495784 NACAP1Q9BZK3 213 aa22■■□□□ 1.11
CLCNKA-207ENST00000495784 SENP6Q9GZR1 1112 aaPredicted RBP22■■□□□ 1.11
CLCNKA-207ENST00000495784 EPB41L4AQ9HCS5 686 aaPredicted RBP22■■□□□ 1.11
CLCNKA-207ENST00000495784 DNM1LO00429 736 aa21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 VWA5AO00534 786 aa21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 MAGEA10P43363 369 aaPredicted RBP21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 RIOX2Q8IUF8 465 aa21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 ZNF444Q8N0Y2 327 aaPredicted RBP21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 MMP19Q99542 508 aa21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 NYAP2Q9P242 653 aa21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 ZBTB47Q9UFB7 747 aaPredicted RBP21.99■■□□□ 1.11
CLCNKA-207ENST00000495784 PATL2C9JE40 543 aaKnown RBP21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 COPB2P35606 906 aa21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 STAT3P40763 770 aa21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 KCTD2Q14681 263 aa21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 ARRDC4Q8NCT1 418 aa21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 PI4K2BQ8TCG2 481 aa21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 OTUD7AQ8TE49 926 aaPredicted RBP21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 MAML3Q96JK9 1138 aa21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 NUP88Q99567 741 aaPredicted RBP21.98■■□□□ 1.11
CLCNKA-207ENST00000495784 FRMPD3Q5JV73 1810 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 F5H6K3 240 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 SEPT4O43236 478 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 PRDM1O75626 825 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 NDUFB10O96000 172 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 MX1P20591 662 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 RRP1P56182 461 aaKnown RBP21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 KLRC3Q07444 240 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 ANO1Q5XXA6 986 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 IFNL3Q8IZI9 196 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 SLF1Q9BQI6 1058 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 CLIP2Q9UDT6 1046 aa21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 ZNF214Q9UL59 606 aaPredicted RBP21.97■■□□□ 1.11
CLCNKA-207ENST00000495784 MYCNP04198 464 aaPredicted RBP21.96■■□□□ 1.11
CLCNKA-207ENST00000495784 ATN1P54259 1190 aaPredicted RBP21.96■■□□□ 1.11
CLCNKA-207ENST00000495784 PRAMEF19Q5SWL8 479 aa21.96■■□□□ 1.11
CLCNKA-207ENST00000495784 SEC62Q99442 399 aaKnown RBP21.96■■□□□ 1.11
CLCNKA-207ENST00000495784 UBE2OQ9C0C9 1292 aaKnown RBP21.96■■□□□ 1.11
CLCNKA-207ENST00000495784 PARP14Q460N5 1801 aa21.96■■□□□ 1.11
CLCNKA-207ENST00000495784 SZT2Q5T011 3432 aa21.96■■□□□ 1.11
CLCNKA-207ENST00000495784 KBTBD13C9JR72 458 aa21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 SOX1O00570 391 aaPredicted RBP21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 PGK2P07205 417 aa21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 SLC3A2P08195 630 aaKnown RBP21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 GJC2Q5T442 439 aaPredicted RBP21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 REPS2Q8NFH8 660 aa21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 NAPBQ9H115 298 aa21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 GREB1LQ9C091 1923 aaPredicted RBP21.95■■□□□ 1.1
CLCNKA-207ENST00000495784 IGKV6D-41A0A0C4DH26 115 aa21.94■■□□□ 1.1
CLCNKA-207ENST00000495784 PDE4BQ07343 736 aa21.94■■□□□ 1.1
CLCNKA-207ENST00000495784 PRPF38AQ8NAV1 312 aaKnown RBP21.94■■□□□ 1.1
CLCNKA-207ENST00000495784 CEP95Q96GE4 821 aa21.94■■□□□ 1.1
CLCNKA-207ENST00000495784 LRCH3Q96II8 777 aa21.94■■□□□ 1.1
CLCNKA-207ENST00000495784 TEX13BQ9BXU2 312 aa21.94■■□□□ 1.1
CLCNKA-207ENST00000495784 CTDP1Q9Y5B0 961 aaPredicted RBP21.94■■□□□ 1.1
CLCNKA-207ENST00000495784 TTLL1O95922 423 aa21.93■■□□□ 1.1
CLCNKA-207ENST00000495784 ZMYM1Q5SVZ6 1142 aa21.93■■□□□ 1.1
CLCNKA-207ENST00000495784 SNRNP48Q6IEG0 339 aaKnown RBP21.93■■□□□ 1.1
CLCNKA-207ENST00000495784 TDHQ8IZJ6 230 aa21.93■■□□□ 1.1
CLCNKA-207ENST00000495784 MTMR4Q9NYA4 1195 aa21.93■■□□□ 1.1
CLCNKA-207ENST00000495784 NRBP1Q9UHY1 535 aa21.93■■□□□ 1.1
CLCNKA-207ENST00000495784 DIS3Q9Y2L1 958 aaKnown RBP21.93■■□□□ 1.1
CLCNKA-207ENST00000495784 COL11A1P12107 1806 aaPredicted RBP21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 TSPY3P0CV98 308 aa21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 TSPY8P0CW00 308 aa21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 MDM2Q00987 491 aaPredicted RBP21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 ANKRD45Q5TZF3 282 aa21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 LRRC47Q8N1G4 583 aaKnown RBP21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 MKL1Q969V6 931 aa21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 CRBNQ96SW2 442 aa21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 LBHD1Q9BQE6 289 aaPredicted RBP21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 TINF2Q9BSI4 451 aa21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 SYNPO2Q9UMS6 1093 aa21.92■■□□□ 1.1
CLCNKA-207ENST00000495784 ZBED4O75132 1171 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 SLC4A3P48751 1232 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 RTP1P59025 263 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 PPARAQ07869 468 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 ZNF792Q3KQV3 632 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 CPXCR1Q8N123 301 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 NEDD1Q8NHV4 660 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 KIFC2Q96AC6 838 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 PRKAG2Q9UGJ0 569 aa21.91■■□□□ 1.1
CLCNKA-207ENST00000495784 LAMA3Q16787 3333 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms