RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	TRIM32	Q13049	653 aa		13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	FAM83B	Q5T0W9	1011 aa		13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	NKX2-3	Q8TAU0	364 aa		13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	TRIB2	Q92519	343 aa		13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	SPATC1L	Q9H0A9	340 aa		13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	PAK6	Q9NQU5	681 aa	Predicted RBP	13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	SYNPO2	Q9UMS6	1093 aa		13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	ZNF236	Q9UL36	1845 aa		13.01	□□□□□ -0.33
DCTN1-223	ENST00000495643	ZNFX1	Q9P2E3	1918 aa	Known RBP	13	□□□□□ -0.33
DCTN1-223	ENST00000495643	SLC15A5	A6NIM6	579 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	ORC4	O43929	436 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	RAD21	O60216	631 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	NDUFB10	O96000	172 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	GSPT1	P15170	499 aa	Known RBP	13	□□□□□ -0.33
DCTN1-223	ENST00000495643	RGS2	P41220	211 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	MFAP1	P55081	439 aa	Known RBP	13	□□□□□ -0.33
DCTN1-223	ENST00000495643	MAP2K5	Q13163	448 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	GRB14	Q14449	540 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	TMEM132B	Q14DG7	1078 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	TTC22	Q5TAA0	569 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	MAP3K21	Q5TCX8	1036 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	CWC27	Q6UX04	472 aa	Known RBP	13	□□□□□ -0.33
DCTN1-223	ENST00000495643	TRMT44	Q8IYL2	757 aa	Known RBP	13	□□□□□ -0.33
DCTN1-223	ENST00000495643	SHCBP1	Q8NEM2	672 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	U2AF1L4	Q8WU68	220 aa	Known RBP	13	□□□□□ -0.33
DCTN1-223	ENST00000495643	NUP88	Q99567	741 aa	Predicted RBP	13	□□□□□ -0.33
DCTN1-223	ENST00000495643	IL17RB	Q9NRM6	502 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	PPP1R9A	Q9ULJ8	1098 aa		13	□□□□□ -0.33
DCTN1-223	ENST00000495643	LAMA4	Q16363	1823 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	RPTOR	Q8N122	1335 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	HIP1	O00291	1037 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	VWA5A	O00534	786 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	STRN	O43815	780 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	SGPL1	O95470	568 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	HOXC6	P09630	235 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	NOV	P48745	357 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	CCL14	Q16627	93 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	WDR78	Q5VTH9	848 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	UBE2Q1	Q7Z7E8	422 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	GMCL1P1	Q8NEA9	526 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	REPS2	Q8NFH8	660 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	APBA2	Q99767	749 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	NBPF3	Q9H094	633 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	CWC22	Q9HCG8	908 aa	Known RBP	12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	DIAPH3	Q9NSV4	1193 aa		12.99	□□□□□ -0.33
DCTN1-223	ENST00000495643	TSPY2	A6NKD2	308 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	RANBP6	O60518	1105 aa	Known RBP	12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	NMT2	O60551	498 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	IGHA2	P01877	340 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	ERCC3	P19447	782 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	PLS1	Q14651	629 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	LRRC47	Q8N1G4	583 aa	Known RBP	12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	DEFB118	Q96PH6	123 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	SLF1	Q9BQI6	1058 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	CRISPLD2	Q9H0B8	497 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	MROH8	Q9H579	483 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	FLRT1	Q9NZU1	646 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	ZNF214	Q9UL59	606 aa	Predicted RBP	12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	IVNS1ABP	Q9Y6Y0	642 aa		12.98	□□□□□ -0.33
DCTN1-223	ENST00000495643	PRKAR2A	P13861	404 aa	Known RBP	12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	ZKSCAN1	P17029	563 aa	Predicted RBP	12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	CAPN2	P17655	700 aa		12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	HAND2	P61296	217 aa		12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	CACNB2	Q08289	660 aa	Predicted RBP	12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	PPP4R3B	Q5MIZ7	849 aa		12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	RIOX2	Q8IUF8	465 aa		12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	PRPF38A	Q8NAV1	312 aa	Known RBP	12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	NPLOC4	Q8TAT6	608 aa		12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	IL25	Q9H293	177 aa		12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	HMX1	Q9NP08	348 aa	Predicted RBP	12.97	□□□□□ -0.33
DCTN1-223	ENST00000495643	COBL	O75128	1261 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	SLC25A27	O95847	323 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	PC	P11498	1178 aa	Known RBP	12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	ADORA2A	P29274	412 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	STAT3	P40763	770 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	AKNAD1	Q5T1N1	836 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	SLFN13	Q68D06	897 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	NCAPG2	Q86XI2	1143 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	TBC1D10C	Q8IV04	446 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	ABRA	Q8N0Z2	381 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	STAG1	Q8WVM7	1258 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	GMCL1	Q96IK5	515 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	DSCC1	Q9BVC3	393 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	TCP11L1	Q9NUJ3	509 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	FEM1B	Q9UK73	627 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	STX8	Q9UNK0	236 aa		12.96	□□□□□ -0.33
DCTN1-223	ENST00000495643	PLXNA1	Q9UIW2	1896 aa		12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	ATP2A1	O14983	1001 aa		12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	TFRC	P02786	760 aa	Known RBP	12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	BMP3	P12645	472 aa		12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	RRP12	Q5JTH9	1297 aa	Known RBP	12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	PRPF38B	Q5VTL8	546 aa	Known RBP	12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	MFSD6	Q6ZSS7	791 aa		12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	TOMM22	Q9NS69	142 aa		12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	FRMPD3	Q5JV73	1810 aa		12.95	□□□□□ -0.34
DCTN1-223	ENST00000495643	TMEM232	C9JQI7	657 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	ZNF213	O14771	459 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	PLA2G6	O60733	806 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms