RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SLFN13Q68D06 897 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 ESR2Q92731 530 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 TMEM47Q9BQJ4 181 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 ZKSCAN3Q9BRR0 538 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 HOXC10Q9NYD6 342 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 ZSWIM5Q9P217 1185 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 MGAMO43451 1857 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 MYPNQ86TC9 1320 aa20.21■□□□□ 0.83
SNX17-209ENST00000494893 CYB5R4Q7L1T6 521 aa20.2■□□□□ 0.82
SNX17-209ENST00000494893 REPS2Q8NFH8 660 aa20.2■□□□□ 0.82
SNX17-209ENST00000494893 CHMP4CQ96CF2 233 aa20.2■□□□□ 0.82
SNX17-209ENST00000494893 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
SNX17-209ENST00000494893 TNPO2O14787 897 aaKnown RBP20.19■□□□□ 0.82
SNX17-209ENST00000494893 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
SNX17-209ENST00000494893 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
SNX17-209ENST00000494893 GMCL1Q96IK5 515 aa20.19■□□□□ 0.82
SNX17-209ENST00000494893 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
SNX17-209ENST00000494893 GJD2Q9UKL4 321 aa20.19■□□□□ 0.82
SNX17-209ENST00000494893 E7EWF7 191 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 TOP1P11387 765 aaKnown RBP20.18■□□□□ 0.82
SNX17-209ENST00000494893 MCCP23508 829 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 PRMT2P55345 433 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 TMEM132BQ14DG7 1078 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 NECTIN1Q15223 517 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 IFFO2Q5TF58 517 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 KRT23Q9C075 422 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 PLXNB2O15031 1838 aa20.18■□□□□ 0.82
SNX17-209ENST00000494893 VWA5AO00534 786 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 SLC27A2O14975 620 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 BMP3P12645 472 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 FLT3LGP49771 235 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 NT5C2P49902 561 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 KIAA1211Q6ZU35 1233 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 ANKS1AQ92625 1134 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 TTC14Q96N46 770 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 SLF1Q9BQI6 1058 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 MOV10L1Q9BXT6 1211 aaKnown RBP20.17■□□□□ 0.82
SNX17-209ENST00000494893 CNNM2Q9H8M5 875 aa20.17■□□□□ 0.82
SNX17-209ENST00000494893 CAPN15O75808 1086 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 HOXD10P28358 340 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 KCTD1Q719H9 257 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 GPR142Q7Z601 462 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 MB21D1Q8N884 522 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 ENAHQ8N8S7 591 aaPredicted RBP20.16■□□□□ 0.82
SNX17-209ENST00000494893 COA7Q96BR5 231 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 ARMC5Q96C12 935 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 ZSCAN10Q96SZ4 725 aaPredicted RBP20.16■□□□□ 0.82
SNX17-209ENST00000494893 SPATC1LQ9H0A9 340 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 ZNF214Q9UL59 606 aaPredicted RBP20.16■□□□□ 0.82
SNX17-209ENST00000494893 MTMR7Q9Y216 660 aa20.16■□□□□ 0.82
SNX17-209ENST00000494893 TMEM232C9JQI7 657 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 MAPK4P31152 587 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 ANTXR2P58335 489 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 SEC23AQ15436 765 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 CREB3L3Q68CJ9 461 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 DGKHQ86XP1 1220 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 MB21D2Q8IYB1 491 aaPredicted RBP20.15■□□□□ 0.82
SNX17-209ENST00000494893 SH3TC2Q8TF17 1288 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 USP6NLQ92738 828 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 FEM1BQ9UK73 627 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 TNKSO95271 1327 aa20.15■□□□□ 0.82
SNX17-209ENST00000494893 CENPFP49454 3210 aa20.14■□□□□ 0.82
SNX17-209ENST00000494893 CCDC85CA6NKD9 419 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 SNHG28P0DPA3 235 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 SLC1A4P43007 532 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 IRF5Q13568 498 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 MORN1Q5T089 497 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 PLEKHH3Q7Z736 793 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 IQCA1Q86XH1 822 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 PRPF38AQ8NAV1 312 aaKnown RBP20.14■□□□□ 0.81
SNX17-209ENST00000494893 DOCK3Q8IZD9 2030 aa20.14■□□□□ 0.81
SNX17-209ENST00000494893 COL11A1P12107 1806 aaPredicted RBP20.13■□□□□ 0.81
SNX17-209ENST00000494893 PLA2G6O60733 806 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 PDHBP11177 359 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 CCNA1P78396 465 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 TTBK2Q6IQ55 1244 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 SHCBP1Q8NEM2 672 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 RAET1EQ8TD07 263 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 DCAF4Q8WV16 495 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 KIFC2Q96AC6 838 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 ZNF333Q96JL9 665 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 SENP2Q9HC62 589 aa20.13■□□□□ 0.81
SNX17-209ENST00000494893 ELNP15502 786 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 ERCC3P19447 782 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 PTPREP23469 700 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 GRK4P32298 578 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 PLS1Q14651 629 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 SLC9C1Q4G0N8 1177 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 CHST3Q7LGC8 479 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 RASEFQ8IZ41 740 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 SLC38A10Q9HBR0 1119 aa20.12■□□□□ 0.81
SNX17-209ENST00000494893 FRMPD2Q68DX3 1309 aaPredicted RBP20.11■□□□□ 0.81
SNX17-209ENST00000494893 ADCY3O60266 1144 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 STAT2P52630 851 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 TRDNQ13061 729 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 CCDC178Q5BJE1 867 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 BTNL9Q6UXG8 535 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 RIOX2Q8IUF8 465 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms