RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SNW1Q13573 536 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 AXDND1Q5T1B0 1012 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 FOXP4Q8IVH2 680 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 OGFOD1Q8N543 542 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 PRMT6Q96LA8 375 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 TDRD3Q9H7E2 651 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 BRCA1P38398 1863 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 DDTLA6NHG4 134 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 SPDYE2BA6NHP3 402 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 KLRF2D3W0D1 207 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 CTAGE5O15320 804 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 SPDYE6P0CI01 402 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 CCDC192P0DO97 292 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 TOB1P50616 345 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 NPY5RQ15761 445 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 AGBL3Q8NEM8 1001 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 TSC1Q92574 1164 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 SGIP1Q9BQI5 828 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 TAOK3Q9H2K8 898 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 KINO60870 393 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 CMA1P23946 247 aa21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 CALML3P27482 149 aa21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 CAMK4Q16566 473 aa21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 SH3BP5LQ7L8J4 393 aa21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 METTL16Q86W50 562 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 ZSCAN29Q8IWY8 852 aaPredicted RBP21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 KCNF1Q9H3M0 494 aa21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 DNAJC18Q9H819 358 aa21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 TMOD2Q9NZR1 351 aa21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 BAZ2BQ9UIF8 2168 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-212ENST00000494815 GREB1LQ9C091 1923 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 PLCB2Q00722 1185 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 CEP131Q9UPN4 1083 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 MORC2Q9Y6X9 1032 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 SIPA1L1O43166 1804 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 GOLGA6L6A8MZA4 724 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 CYTH3O43739 400 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 NLRP5P59047 1200 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 SLC35G1Q2M3R5 365 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 FMR1NBQ8N0W7 255 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 TNFRSF25Q93038 417 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 MTMR7Q9Y216 660 aa21.21■□□□□ 0.99
TSPAN4-212ENST00000494815 SNHG28P0DPA3 235 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 PDHBP11177 359 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 DLGAP5Q15398 846 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 TRIM34Q9BYJ4 488 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 MARCKSP29966 332 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 ASPRV1Q53RT3 343 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 TATDN1Q6P1N9 297 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 CCDC148Q8NFR7 591 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 PYCARDQ9ULZ3 195 aa21.2■□□□□ 0.98
TSPAN4-212ENST00000494815 CUTAO60888 179 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 GOLGA8HP0CJ92 632 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 GALNT17Q6IS24 598 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 MTMR14Q8NCE2 650 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 CLIP2Q9UDT6 1046 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 JDP2Q8WYK2 163 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 BARHL2Q9NY43 387 aa21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 PPP1R1BQ9UD71 204 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-212ENST00000494815 A0A1B0GVL5 298 aa21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 MPHOSPH10O00566 681 aaKnown RBP21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 VEGFAP15692 232 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 NDUFA8P51970 172 aa21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 CXCL9Q07325 125 aa21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 CERKLQ49MI3 558 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 CKAP2LQ8IYA6 745 aa21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 KRI1Q8N9T8 703 aaKnown RBP21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 ZBTB12Q9Y330 459 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-212ENST00000494815 FAM237AA0A1B0GTK4 181 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 TRIM75PA6NK02 468 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 USP17L5A8MUK1 530 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 BMP15O95972 392 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 TRAPPC10P48553 1259 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 UTP14CQ5TAP6 766 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 FKBP1CQ5VVH2 108 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 LRRC47Q8N1G4 583 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 FAM200AQ8TCP9 573 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 RRP36Q96EU6 259 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 PCDHB6Q9Y5E3 794 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 NFKBIEO00221 500 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 MMP14P50281 582 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 TYRO3Q06418 890 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 RASGRP2Q7LDG7 609 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 DAGLBQ8NCG7 672 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 GPKOWQ92917 476 aaPredicted RBP eCLIP21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 KANSL2Q9H9L4 492 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 PCDHA4Q9UN74 947 aa21.17■□□□□ 0.98
TSPAN4-212ENST00000494815 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 EIF6P56537 245 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 DMTNQ08495 405 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 SPDYE2Q495Y8 402 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 WWC2Q6AWC2 1192 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 CIAPIN1Q6FI81 312 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 CLEC10AQ8IUN9 316 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 CCDC12Q8WUD4 166 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 UPF1Q92900 1129 aaKnown RBP eCLIP21.16■□□□□ 0.982e-9■■■■■ 55.1
TSPAN4-212ENST00000494815 RIOX1Q9H6W3 641 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms