RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, human

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDC1-208	ENST00000494654	N4BP1	O75113	896 aa	Known RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CAND2	O75155	1236 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	SMNDC1	O75940	238 aa	Known RBP eCLIP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	IFIT2	P09913	472 aa	Known RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	GOLGA6D	P0CG33	693 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	BMP1	P13497	986 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CD151	P48509	253 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	RBM5	P52756	815 aa	Known RBP eCLIP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	VSNL1	P62760	191 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PRR20E	P86478	221 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PRR20C	P86479	221 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PRR20D	P86480	221 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PRR20B	P86481	221 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PRR20A	P86496	221 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	ACTN3	Q08043	901 aa	Predicted RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	G3BP1	Q13283	466 aa	Known RBP eCLIP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	ANKRD1	Q15327	319 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	TWISTNB	Q3B726	338 aa	Predicted RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CCDC40	Q4G0X9	1142 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	C1QTNF12	Q5T7M4	302 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PDXDC2P	Q6P474	469 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	ARHGEF25	Q86VW2	580 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	VSTM4	Q8IW00	320 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	NBPF15	Q8N660	670 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	ZNF513	Q8N8E2	541 aa	Predicted RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	IGSF22	Q8N9C0	903 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	KLHL23	Q8NBE8	558 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	C3orf20	Q8ND61	904 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	SMARCC2	Q8TAQ2	1214 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CCHCR1	Q8TD31	782 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	BCAS4	Q8TDM0	211 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	ZFAND2B	Q8WV99	257 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	P3H4	Q92791	437 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	DDX17	Q92841	729 aa	Known RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CCDC47	Q96A33	483 aa	Known RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	DTNBP1	Q96EV8	351 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PGBD1	Q96JS3	809 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	RPGRIP1	Q96KN7	1286 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	JAKMIP1	Q96N16	626 aa	Known RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	C8orf37	Q96NL8	207 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	SH3GL2	Q99962	352 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	ARHGAP9	Q9BRR9	750 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CRACR2A	Q9BSW2	395 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	NAA15	Q9BXJ9	866 aa	Known RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	STK31	Q9BXU1	1019 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CAPS2	Q9BXY5	557 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	LRRCC1	Q9C099	1032 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	PLEKHA4	Q9H4M7	779 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	KAT14	Q9H8E8	782 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	EBF2	Q9HAK2	575 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CD248	Q9HCU0	757 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	SLC39A2	Q9NP94	309 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	TMPRSS4	Q9NRS4	437 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	KLC4	Q9NSK0	619 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	IRAK4	Q9NWZ3	460 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	HYPK	Q9NX55	129 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CHCHD3	Q9NX63	227 aa	Known RBP	3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	GOLGA6A	Q9NYA3	693 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	IFNK	Q9P0W0	207 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	MYO1A	Q9UBC5	1043 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	ANAPC4	Q9UJX5	808 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	CYP46A1	Q9Y6A2	500 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	TNR	Q92752	1358 aa		3.08	□□□□□ -1.92
MDC1-208	ENST00000494654	SIPA1L1	O43166	1804 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	PSME4	Q14997	1843 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	TAF1L	Q8IZX4	1826 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	BAZ2A	Q9UIF9	1905 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	MYH9	P35579	1960 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654		A0A1W2PQ27	194 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654		A0A1W2PQ64	194 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654		A0A1W2PQD8	194 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	ERICH2	A1L162	156 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	CTAGE15	A4D2H0	777 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	PIK3CD	O00329	1044 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	OPA1	O60313	960 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	DIAPH1	O60610	1272 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	DNAJC8	O75937	253 aa	Predicted RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	LUC7L3	O95232	432 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	ADAMTS2	O95450	1211 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	STAU1	O95793	577 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	CCDC175	P0C221	793 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	CTAGE8	P0CG41	777 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	GHR	P10912	638 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	EPB41	P11171	864 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	FSHR	P23945	695 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	VARS	P26640	1264 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	TNFRSF8	P28908	595 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	LTK	P29376	864 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	GCLC	P48506	637 aa	Predicted RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	CDR1	P51861	262 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	NAP1L1	P55209	391 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	NLRP12	P59046	1061 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	GNG11	P61952	73 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	GNGT1	P63211	74 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	CCT2	P78371	535 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	FANCC	Q00597	558 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	APBA1	Q02410	837 aa		3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	CKAP4	Q07065	602 aa	Known RBP	3.07	□□□□□ -1.92
MDC1-208	ENST00000494654	CBLB	Q13191	982 aa		3.07	□□□□□ -1.92

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