RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 XRN2Q9H0D6 950 aaKnown RBP eCLIP39.46■■■■□ 3.916e-7■■■■■ 30.4
CBX4-203ENST00000494546 PAK6Q9NQU5 681 aaPredicted RBP39.46■■■■□ 3.91
CBX4-203ENST00000494546 SLC15A5A6NIM6 579 aa39.45■■■■□ 3.91
CBX4-203ENST00000494546 ALX1Q15699 326 aa39.45■■■■□ 3.91
CBX4-203ENST00000494546 CCL14Q16627 93 aa39.45■■■■□ 3.91
CBX4-203ENST00000494546 INCENPQ9NQS7 918 aa39.45■■■■□ 3.91
CBX4-203ENST00000494546 CCDC171Q6TFL3 1326 aa39.44■■■■□ 3.9
CBX4-203ENST00000494546 A0A0G2JMZ2 1700 aa39.44■■■■□ 3.9
CBX4-203ENST00000494546 NDUFB10O96000 172 aa39.44■■■■□ 3.9
CBX4-203ENST00000494546 PRPF38BQ5VTL8 546 aaKnown RBP39.44■■■■□ 3.9
CBX4-203ENST00000494546 HMX1Q9NP08 348 aaPredicted RBP39.44■■■■□ 3.9
CBX4-203ENST00000494546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP39.44■■■■□ 3.9
CBX4-203ENST00000494546 PLIN4Q96Q06 1357 aa39.44■■■■□ 3.9
CBX4-203ENST00000494546 RPTORQ8N122 1335 aa39.43■■■■□ 3.9
CBX4-203ENST00000494546 MKI67P46013 3256 aaKnown RBP39.43■■■■□ 3.9
CBX4-203ENST00000494546 TTLL1O95922 423 aa39.43■■■■□ 3.9
CBX4-203ENST00000494546 TFRCP02786 760 aaKnown RBP39.43■■■■□ 3.9
CBX4-203ENST00000494546 HSPD1P10809 573 aaKnown RBP39.43■■■■□ 3.9
CBX4-203ENST00000494546 ERCC3P19447 782 aa39.43■■■■□ 3.9
CBX4-203ENST00000494546 ANAPC4Q9UJX5 808 aa39.43■■■■□ 3.9
CBX4-203ENST00000494546 PPP1R9AQ9ULJ8 1098 aa39.43■■■■□ 3.9
CBX4-203ENST00000494546 FGAP02671 866 aa39.42■■■■□ 3.9
CBX4-203ENST00000494546 LRRC47Q8N1G4 583 aaKnown RBP39.42■■■■□ 3.9
CBX4-203ENST00000494546 SHCBP1Q8NEM2 672 aa39.42■■■■□ 3.9
CBX4-203ENST00000494546 MKL1Q969V6 931 aa39.42■■■■□ 3.9
CBX4-203ENST00000494546 PRKAR2AP13861 404 aaKnown RBP39.41■■■■□ 3.9
CBX4-203ENST00000494546 GRB14Q14449 540 aa39.41■■■■□ 3.9
CBX4-203ENST00000494546 NCAPG2Q86XI2 1143 aa39.41■■■■□ 3.9
CBX4-203ENST00000494546 DIAPH3Q9NSV4 1193 aa39.41■■■■□ 3.9
CBX4-203ENST00000494546 TSPY2A6NKD2 308 aa39.4■■■■□ 3.9
CBX4-203ENST00000494546 PDE4AP27815 886 aa39.4■■■■□ 3.9
CBX4-203ENST00000494546 TMEM132BQ14DG7 1078 aa39.4■■■■□ 3.9
CBX4-203ENST00000494546 ADAMTS5Q9UNA0 930 aa39.4■■■■□ 3.9
CBX4-203ENST00000494546 MFAP1P55081 439 aaKnown RBP39.39■■■■□ 3.9
CBX4-203ENST00000494546 CWC27Q6UX04 472 aaKnown RBP39.39■■■■□ 3.9
CBX4-203ENST00000494546 TACC3Q9Y6A5 838 aa39.39■■■■□ 3.9
CBX4-203ENST00000494546 PARP14Q460N5 1801 aa39.38■■■■□ 3.89
CBX4-203ENST00000494546 VWA5AO00534 786 aa39.38■■■■□ 3.89
CBX4-203ENST00000494546 RANBP6O60518 1105 aaKnown RBP39.38■■■■□ 3.89
CBX4-203ENST00000494546 FARP2O94887 1054 aaPredicted RBP39.38■■■■□ 3.89
CBX4-203ENST00000494546 MAP3K21Q5TCX8 1036 aa39.38■■■■□ 3.89
CBX4-203ENST00000494546 SLF1Q9BQI6 1058 aa39.38■■■■□ 3.89
CBX4-203ENST00000494546 MROH8Q9H579 483 aa39.38■■■■□ 3.89
CBX4-203ENST00000494546 MYH4Q9Y623 1939 aa39.38■■■■□ 3.89
CBX4-203ENST00000494546 CACNB2Q08289 660 aaPredicted RBP39.37■■■■□ 3.89
CBX4-203ENST00000494546 TOMM22Q9NS69 142 aa39.37■■■■□ 3.89
CBX4-203ENST00000494546 SYNPO2Q9UMS6 1093 aa39.37■■■■□ 3.89
CBX4-203ENST00000494546 HIP1O00291 1037 aa39.36■■■■□ 3.89
CBX4-203ENST00000494546 STRNO43815 780 aa39.36■■■■□ 3.89
CBX4-203ENST00000494546 ADORA2AP29274 412 aa39.36■■■■□ 3.89
CBX4-203ENST00000494546 DPP9Q86TI2 863 aa39.36■■■■□ 3.89
CBX4-203ENST00000494546 CRISPLD2Q9H0B8 497 aa39.36■■■■□ 3.89
CBX4-203ENST00000494546 UBE2Q1Q7Z7E8 422 aa39.35■■■■□ 3.89
CBX4-203ENST00000494546 GMCL1P1Q8NEA9 526 aa39.35■■■■□ 3.89
CBX4-203ENST00000494546 NPLOC4Q8TAT6 608 aa39.35■■■■□ 3.89
CBX4-203ENST00000494546 FLRT1Q9NZU1 646 aa39.35■■■■□ 3.89
CBX4-203ENST00000494546 ZMYM6O95789 1325 aa39.35■■■■□ 3.89
CBX4-203ENST00000494546 SLC25A27O95847 323 aa39.34■■■■□ 3.89
CBX4-203ENST00000494546 HOXC6P09630 235 aa39.34■■■■□ 3.89
CBX4-203ENST00000494546 HAND2P61296 217 aa39.34■■■■□ 3.89
CBX4-203ENST00000494546 RRP12Q5JTH9 1297 aaKnown RBP39.34■■■■□ 3.89
CBX4-203ENST00000494546 PPP4R3BQ5MIZ7 849 aa39.34■■■■□ 3.89
CBX4-203ENST00000494546 SLFN13Q68D06 897 aa39.34■■■■□ 3.89
CBX4-203ENST00000494546 STX8Q9UNK0 236 aa39.34■■■■□ 3.89
CBX4-203ENST00000494546 ORC4O43929 436 aa39.33■■■■□ 3.89
CBX4-203ENST00000494546 NMT2O60551 498 aa39.33■■■■□ 3.89
CBX4-203ENST00000494546 CAPN2P17655 700 aa39.33■■■■□ 3.89
CBX4-203ENST00000494546 STAT3P40763 770 aa39.33■■■■□ 3.89
CBX4-203ENST00000494546 MFSD14CQ5VZR4 134 aa39.33■■■■□ 3.89
CBX4-203ENST00000494546 IL17RBQ9NRM6 502 aa39.33■■■■□ 3.89
CBX4-203ENST00000494546 ISY1Q9ULR0 285 aaKnown RBP39.33■■■■□ 3.89
CBX4-203ENST00000494546 FGRP09769 529 aa39.32■■■■□ 3.89
CBX4-203ENST00000494546 RIOX2Q8IUF8 465 aa39.32■■■■□ 3.89
CBX4-203ENST00000494546 PRPF38AQ8NAV1 312 aaKnown RBP39.32■■■■□ 3.89
CBX4-203ENST00000494546 REPS2Q8NFH8 660 aa39.32■■■■□ 3.89
CBX4-203ENST00000494546 COL11A1P12107 1806 aaPredicted RBP39.31■■■■□ 3.88
CBX4-203ENST00000494546 TTC22Q5TAA0 569 aa39.31■■■■□ 3.88
CBX4-203ENST00000494546 CHMP4CQ96CF2 233 aa39.31■■■■□ 3.88
CBX4-203ENST00000494546 ZNF214Q9UL59 606 aaPredicted RBP39.31■■■■□ 3.88
CBX4-203ENST00000494546 CCND3P30281 292 aaPredicted RBP39.3■■■■□ 3.88
CBX4-203ENST00000494546 KIFC2Q96AC6 838 aa39.3■■■■□ 3.88
CBX4-203ENST00000494546 FCER1AP12319 257 aa39.29■■■■□ 3.88
CBX4-203ENST00000494546 BMP3P12645 472 aa39.29■■■■□ 3.88
CBX4-203ENST00000494546 ABRAQ8N0Z2 381 aa39.29■■■■□ 3.88
CBX4-203ENST00000494546 FEM1BQ9UK73 627 aa39.29■■■■□ 3.88
CBX4-203ENST00000494546 CTDP1Q9Y5B0 961 aaPredicted RBP39.29■■■■□ 3.88
CBX4-203ENST00000494546 COBLO75128 1261 aa39.28■■■■□ 3.88
CBX4-203ENST00000494546 GSPT1P15170 499 aaKnown RBP39.28■■■■□ 3.88
CBX4-203ENST00000494546 DPF3Q92784 378 aa39.28■■■■□ 3.88
CBX4-203ENST00000494546 SLC5A4Q9NY91 659 aa39.28■■■■□ 3.88
CBX4-203ENST00000494546 ZBED4O75132 1171 aa39.27■■■■□ 3.88
CBX4-203ENST00000494546 MMP19Q99542 508 aa39.27■■■■□ 3.88
CBX4-203ENST00000494546 HTATIP2Q9BUP3 242 aa39.27■■■■□ 3.88
CBX4-203ENST00000494546 ZNF236Q9UL36 1845 aa39.27■■■■□ 3.88
CBX4-203ENST00000494546 CYP2C19P33261 490 aa39.26■■■■□ 3.88
CBX4-203ENST00000494546 AKNAD1Q5T1N1 836 aa39.26■■■■□ 3.88
CBX4-203ENST00000494546 MFSD6Q6ZSS7 791 aa39.26■■■■□ 3.88
CBX4-203ENST00000494546 TEX13BQ9BXU2 312 aa39.26■■■■□ 3.88
CBX4-203ENST00000494546 NBPF3Q9H094 633 aa39.26■■■■□ 3.88
CBX4-203ENST00000494546 MCCP23508 829 aa39.25■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms