RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 FBXO28Q9NVF7 368 aa15.22■□□□□ 0.03
SKA1-205ENST00000494518 TMX2Q9Y320 296 aa15.22■□□□□ 0.03
SKA1-205ENST00000494518 MCM3APO60318 1980 aa15.22■□□□□ 0.03
SKA1-205ENST00000494518 MSCO60682 206 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.03
SKA1-205ENST00000494518 RTP1P59025 263 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 C16orf86Q6ZW13 317 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 AMOTL1Q8IY63 956 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 SHCBP1Q8NEM2 672 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
SKA1-205ENST00000494518 PUS7LQ9H0K6 701 aaKnown RBP15.21■□□□□ 0.03
SKA1-205ENST00000494518 SH2D4AQ9H788 454 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 RCAN3Q9UKA8 241 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 ATP11BQ9Y2G3 1177 aa15.21■□□□□ 0.03
SKA1-205ENST00000494518 DNM1LO00429 736 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 WDR46O15213 610 aaKnown RBP15.2■□□□□ 0.02
SKA1-205ENST00000494518 IGHA2P01877 340 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 TMEM132BQ14DG7 1078 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 TSHZ3Q63HK5 1081 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 OLFML2BQ68BL8 750 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 MB21D1Q8N884 522 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 LRRCC1Q9C099 1032 aa15.2■□□□□ 0.02
SKA1-205ENST00000494518 STRNO43815 780 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 PGK2P07205 417 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 CTR9Q6PD62 1173 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
SKA1-205ENST00000494518 LBHD1Q9BQE6 289 aaPredicted RBP15.19■□□□□ 0.02
SKA1-205ENST00000494518 MROH8Q9H579 483 aa15.19■□□□□ 0.02
SKA1-205ENST00000494518 PRDM5Q9NQX1 630 aaPredicted RBP15.19■□□□□ 0.02
SKA1-205ENST00000494518 KBTBD13C9JR72 458 aa15.18■□□□□ 0.02
SKA1-205ENST00000494518 SEPT4O43236 478 aa15.18■□□□□ 0.02
SKA1-205ENST00000494518 FCER1AP12319 257 aa15.18■□□□□ 0.02
SKA1-205ENST00000494518 FAM47AQ5JRC9 791 aa15.18■□□□□ 0.02
SKA1-205ENST00000494518 MAML3Q96JK9 1138 aa15.18■□□□□ 0.02
SKA1-205ENST00000494518 MMP19Q99542 508 aa15.18■□□□□ 0.02
SKA1-205ENST00000494518 UNC80Q8N2C7 3258 aa15.18■□□□□ 0.02
SKA1-205ENST00000494518 MINDY4BA8MYZ0 360 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 TRIM60Q495X7 471 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 ARRDC4Q8NCT1 418 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 LENG1Q96BZ8 264 aaPredicted RBP15.17■□□□□ 0.02
SKA1-205ENST00000494518 FAM161BQ96MY7 647 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.17■□□□□ 0.02
SKA1-205ENST00000494518 CHMP4BQ9H444 224 aaKnown RBP15.17■□□□□ 0.02
SKA1-205ENST00000494518 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 MTMR10Q9NXD2 777 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 SLC5A4Q9NY91 659 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 PRKAG2Q9UGJ0 569 aa15.17■□□□□ 0.02
SKA1-205ENST00000494518 DLL1O00548 723 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 TAL1P17542 331 aaPredicted RBP15.16■□□□□ 0.02
SKA1-205ENST00000494518 ADCYAP1R1P41586 468 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 SLC4A3P48751 1232 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 LRRC41Q15345 812 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 ZSCAN25Q6NSZ9 544 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 GPR153Q6NV75 609 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 SLC39A5Q6ZMH5 540 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 ECHDC1Q9NTX5 307 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 ARPP21Q9UBL0 812 aaPredicted RBP15.16■□□□□ 0.02
SKA1-205ENST00000494518 PPP1R9AQ9ULJ8 1098 aa15.16■□□□□ 0.02
SKA1-205ENST00000494518 VWA5AO00534 786 aa15.15■□□□□ 0.02
SKA1-205ENST00000494518 SLC25A27O95847 323 aa15.15■□□□□ 0.02
SKA1-205ENST00000494518 RASA1P20936 1047 aa15.15■□□□□ 0.02
SKA1-205ENST00000494518 STAT3P40763 770 aa15.15■□□□□ 0.02
SKA1-205ENST00000494518 RIOX2Q8IUF8 465 aa15.15■□□□□ 0.02
SKA1-205ENST00000494518 ABRAQ8N0Z2 381 aa15.15■□□□□ 0.02
SKA1-205ENST00000494518 OSBP2Q969R2 916 aa15.15■□□□□ 0.02
SKA1-205ENST00000494518 STRBPQ96SI9 672 aaKnown RBP15.15■□□□□ 0.02
SKA1-205ENST00000494518 GSG1L2A8MUP6 293 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 M0R2C6 588 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 PRDM1O75626 825 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 PGK1P00558 417 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 KCTD2Q14681 263 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 SH3RF1Q7Z6J0 888 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 MKNK2Q9HBH9 465 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 EPB41L4AQ9HCS5 686 aaPredicted RBP15.14■□□□□ 0.01
SKA1-205ENST00000494518 XPNPEP3Q9NQH7 507 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 ZNF214Q9UL59 606 aaPredicted RBP15.14■□□□□ 0.01
SKA1-205ENST00000494518 ADAMTS5Q9UNA0 930 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 CDH23Q9H251 3354 aa15.14■□□□□ 0.01
SKA1-205ENST00000494518 EYSQ5T1H1 3165 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 NDUFB10O96000 172 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 RARBP10826 455 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 C9orf50Q5SZB4 431 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 SNRNP48Q6IEG0 339 aaKnown RBP15.13■□□□□ 0.01
SKA1-205ENST00000494518 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 BADQ92934 168 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 CHMP4CQ96CF2 233 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 SLF1Q9BQI6 1058 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 TINF2Q9BSI4 451 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 PDLIM7Q9NR12 457 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
SKA1-205ENST00000494518 RNF113AO15541 343 aaKnown RBP15.12■□□□□ 0.01
SKA1-205ENST00000494518 GPAA1O43292 621 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms