RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 FAM173BQ6P4H8 233 aa23.85■■□□□ 1.41
KPNA1-210ENST00000494339 UBA5Q9GZZ9 404 aa23.85■■□□□ 1.41
KPNA1-210ENST00000494339 SSC5DA1L4H1 1573 aa23.85■■□□□ 1.41
KPNA1-210ENST00000494339 F5H6K3 240 aa23.84■■□□□ 1.41
KPNA1-210ENST00000494339 CTNND1O60716 968 aaKnown RBP23.84■■□□□ 1.41
KPNA1-210ENST00000494339 KLRC3Q07444 240 aa23.84■■□□□ 1.41
KPNA1-210ENST00000494339 SUPT20HL1Q3ZLR7 823 aa23.84■■□□□ 1.41
KPNA1-210ENST00000494339 KCTD1Q719H9 257 aa23.84■■□□□ 1.41
KPNA1-210ENST00000494339 SLC1A4P43007 532 aa23.84■■□□□ 1.41
KPNA1-210ENST00000494339 ZC3H15Q8WU90 426 aaKnown RBP23.84■■□□□ 1.41
KPNA1-210ENST00000494339 WRNIP1Q96S55 665 aa23.84■■□□□ 1.41
KPNA1-210ENST00000494339 SPZ1Q9BXG8 430 aa23.84■■□□□ 1.41
KPNA1-210ENST00000494339 PRKG1Q13976 671 aa23.83■■□□□ 1.41
KPNA1-210ENST00000494339 SKOR2Q2VWA4 1001 aaPredicted RBP23.83■■□□□ 1.41
KPNA1-210ENST00000494339 GMCL1P1Q8NEA9 526 aa23.83■■□□□ 1.41
KPNA1-210ENST00000494339 VAT1LQ9HCJ6 419 aa23.83■■□□□ 1.41
KPNA1-210ENST00000494339 VPS54Q9P1Q0 977 aa23.83■■□□□ 1.41
KPNA1-210ENST00000494339 KCNJ14Q9UNX9 436 aa23.83■■□□□ 1.41
KPNA1-210ENST00000494339 NDUFB10O96000 172 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 SCG2P13521 617 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 VEGFAP15692 232 aaPredicted RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 DNM1Q05193 864 aaKnown RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 PFKFB3Q16875 520 aaPredicted RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 TTBK2Q6IQ55 1244 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 GLIS2Q9BZE0 524 aaPredicted RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 ZSCAN16Q9H4T2 348 aaPredicted RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 RBM27Q9P2N5 1060 aaKnown RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 GPATCH4Q5T3I0 446 aaKnown RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 SPICE1Q8N0Z3 855 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 DCAF4Q8WV16 495 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 ZKSCAN4Q969J2 545 aaPredicted RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 SHISA4Q96DD7 197 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 NUP88Q99567 741 aaPredicted RBP23.82■■□□□ 1.4
KPNA1-210ENST00000494339 ZNF112Q9UJU3 913 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 TMX2Q9Y320 296 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 DOCK1Q14185 1865 aa23.82■■□□□ 1.4
KPNA1-210ENST00000494339 NCLP19338 710 aaKnown RBP23.81■■□□□ 1.4
KPNA1-210ENST00000494339 ZYXQ15942 572 aaKnown RBP23.81■■□□□ 1.4
KPNA1-210ENST00000494339 USP48Q86UV5 1035 aa23.81■■□□□ 1.4
KPNA1-210ENST00000494339 HOMER1Q86YM7 354 aa23.81■■□□□ 1.4
KPNA1-210ENST00000494339 TRAK2O60296 914 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 XBP1P17861 261 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 SMARCA1P28370 1054 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 SLC16A2P36021 539 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 PNMA8AQ86V59 439 aaPredicted RBP23.8■■□□□ 1.4
KPNA1-210ENST00000494339 RGS22Q8NE09 1264 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 KLRG1Q96E93 195 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 SYNPO2Q9UMS6 1093 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 CNPY2Q9Y2B0 182 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 KIF28PB7ZC32 967 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 KIF23Q02241 960 aaPredicted RBP23.8■■□□□ 1.4
KPNA1-210ENST00000494339 GPKOWQ92917 476 aaPredicted RBP eCLIP23.8■■□□□ 1.42e-6■■■■■ 39.1
KPNA1-210ENST00000494339 GMCL1Q96IK5 515 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 RIOX1Q9H6W3 641 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 GDPD2Q9HCC8 539 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 GOPCQ9HD26 462 aa23.8■■□□□ 1.4
KPNA1-210ENST00000494339 DCAF8L1A6NGE4 600 aa23.79■■□□□ 1.4
KPNA1-210ENST00000494339 MMP1P03956 469 aa23.79■■□□□ 1.4
KPNA1-210ENST00000494339 KIAA1755Q5JYT7 1200 aa23.79■■□□□ 1.4
KPNA1-210ENST00000494339 SCYL3Q8IZE3 742 aa23.79■■□□□ 1.4
KPNA1-210ENST00000494339 RRP36Q96EU6 259 aaKnown RBP23.79■■□□□ 1.4
KPNA1-210ENST00000494339 GINM1Q9NU53 330 aa23.79■■□□□ 1.4
KPNA1-210ENST00000494339 MYH15Q9Y2K3 1946 aa23.79■■□□□ 1.4
KPNA1-210ENST00000494339 POTEIP0CG38 1075 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 POTEJP0CG39 1038 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 GNL2Q13823 731 aaKnown RBP23.78■■□□□ 1.4
KPNA1-210ENST00000494339 PIGSQ96S52 555 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 FEZ1Q99689 392 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 SH2D4AQ9H788 454 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 CLEC11AQ9Y240 323 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 HEATR3Q7Z4Q2 680 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 ADGRF4Q8IZF3 695 aa23.78■■□□□ 1.4
KPNA1-210ENST00000494339 SEC63Q9UGP8 760 aaKnown RBP23.78■■□□□ 1.4
KPNA1-210ENST00000494339 USP2O75604 605 aaPredicted RBP23.77■■□□□ 1.4
KPNA1-210ENST00000494339 BMP3P12645 472 aa23.77■■□□□ 1.4
KPNA1-210ENST00000494339 SAFBQ15424 915 aaKnown RBP eCLIP23.77■■□□□ 1.4
KPNA1-210ENST00000494339 CDCA5Q96FF9 252 aa23.77■■□□□ 1.4
KPNA1-210ENST00000494339 VCPKMTQ9H867 229 aa23.77■■□□□ 1.4
KPNA1-210ENST00000494339 RRAGCQ9HB90 399 aa23.77■■□□□ 1.4
KPNA1-210ENST00000494339 PICK1Q9NRD5 415 aa23.77■■□□□ 1.4
KPNA1-210ENST00000494339 FIBPO43427 364 aa23.76■■□□□ 1.39
KPNA1-210ENST00000494339 WWC2Q6AWC2 1192 aa23.76■■□□□ 1.39
KPNA1-210ENST00000494339 DIS3L2Q8IYB7 885 aaKnown RBP23.76■■□□□ 1.39
KPNA1-210ENST00000494339 PHF20Q9BVI0 1012 aa23.76■■□□□ 1.39
KPNA1-210ENST00000494339 JMJD4Q9H9V9 463 aa23.76■■□□□ 1.39
KPNA1-210ENST00000494339 BTBD18B2RXH4 712 aa23.76■■□□□ 1.39
KPNA1-210ENST00000494339 KRT85P78386 507 aa23.76■■□□□ 1.39
KPNA1-210ENST00000494339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.76■■□□□ 1.39
KPNA1-210ENST00000494339 TFIP11Q9UBB9 837 aaKnown RBP23.76■■□□□ 1.39
KPNA1-210ENST00000494339 USP17L10C9JJH3 530 aa23.75■■□□□ 1.39
KPNA1-210ENST00000494339 TMEM232C9JQI7 657 aa23.75■■□□□ 1.39
KPNA1-210ENST00000494339 PRPF40AO75400 957 aaKnown RBP23.75■■□□□ 1.39
KPNA1-210ENST00000494339 IKQ13123 557 aaPredicted RBP23.75■■□□□ 1.39
KPNA1-210ENST00000494339 BRAPQ7Z569 592 aa23.75■■□□□ 1.39
KPNA1-210ENST00000494339 PPP1R12BO60237 982 aaPredicted RBP23.74■■□□□ 1.39
KPNA1-210ENST00000494339 PTPRAP18433 802 aa23.74■■□□□ 1.39
KPNA1-210ENST00000494339 FAM83BQ5T0W9 1011 aa23.74■■□□□ 1.39
KPNA1-210ENST00000494339 TYW1BQ6NUM6 668 aa23.74■■□□□ 1.39
KPNA1-210ENST00000494339 OXER1Q8TDS5 423 aa23.74■■□□□ 1.39
KPNA1-210ENST00000494339 LMBRD1Q9NUN5 540 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms