RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CCDC96Q2M329 555 aa14.64□□□□□ -0.07
TRA2A-209ENST00000494255 CD99L2Q8TCZ2 262 aa14.64□□□□□ -0.07
TRA2A-209ENST00000494255 DCAF4Q8WV16 495 aa14.64□□□□□ -0.07
TRA2A-209ENST00000494255 ANKS1AQ92625 1134 aa14.64□□□□□ -0.07
TRA2A-209ENST00000494255 PAGR1Q9BTK6 254 aa14.64□□□□□ -0.07
TRA2A-209ENST00000494255 USP26Q9BXU7 913 aa14.64□□□□□ -0.07
TRA2A-209ENST00000494255 RABGAP1Q9Y3P9 1069 aa14.64□□□□□ -0.07
TRA2A-209ENST00000494255 MYPNQ86TC9 1320 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 PRC1O43663 620 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 DSG3P32926 999 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 LACTBP83111 547 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-209ENST00000494255 IKQ13123 557 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-209ENST00000494255 TMEM67Q5HYA8 995 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 LBX2Q6XYB7 198 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 PNMA1Q8ND90 353 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 CHMP4CQ96CF2 233 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 NEK1Q96PY6 1258 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 FEM1BQ9UK73 627 aa14.63□□□□□ -0.07
TRA2A-209ENST00000494255 ANTXR2P58335 489 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 WTAPQ15007 396 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 SEC23AQ15436 765 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 CHST3Q7LGC8 479 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 MB21D1Q8N884 522 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 GPRC5AQ8NFJ5 357 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 CHURC1Q8WUH1 139 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 KCNB2Q92953 911 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 SLF1Q9BQI6 1058 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 MTA3Q9BTC8 594 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 FBXO28Q9NVF7 368 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 RBPJLQ9UBG7 517 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 MORF4L1Q9UBU8 362 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 PPP1R9AQ9ULJ8 1098 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 PARP14Q460N5 1801 aa14.62□□□□□ -0.07
TRA2A-209ENST00000494255 TMEM232C9JQI7 657 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 HMGB1P09429 215 aaKnown RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 STAT2P52630 851 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 CCNA1P78396 465 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 FAM160B2Q86V87 743 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 PRPF38AQ8NAV1 312 aaKnown RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 ATG4CQ96DT6 458 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 TMEM87BQ96K49 555 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 CTDP1Q9Y5B0 961 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 RLFQ13129 1914 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 FMNL1O95466 1100 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 PDHBP11177 359 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 PSMA5P28066 241 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 PSMC4P43686 418 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 FCGRTP55899 365 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 ERVK-9P63128 1117 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 ERVK-24P63145 666 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 ADCK5Q3MIX3 580 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 CTU1Q7Z7A3 348 aaKnown RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 TMTC2Q8N394 836 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 KIFC2Q96AC6 838 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 JAKMIP1Q96N16 626 aaKnown RBP14.61□□□□□ -0.07
TRA2A-209ENST00000494255 EFCC1Q9HA90 598 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 TXNRD2Q9NNW7 524 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 PCNTO95613 3336 aa14.61□□□□□ -0.07
TRA2A-209ENST00000494255 DHX32Q7L7V1 743 aaKnown RBP14.6□□□□□ -0.07
TRA2A-209ENST00000494255 IGDCC4Q8TDY8 1250 aa14.6□□□□□ -0.07
TRA2A-209ENST00000494255 GPCPD1Q9NPB8 672 aa14.6□□□□□ -0.07
TRA2A-209ENST00000494255 FRMPD2Q68DX3 1309 aaPredicted RBP14.6□□□□□ -0.07
TRA2A-209ENST00000494255 VWA5AO00534 786 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 PLA2G6O60733 806 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 ZBED4O75132 1171 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 GNRH1P01148 92 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 ZNF543Q08ER8 600 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 PLS1Q14651 629 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 C8orf34Q49A92 452 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 GPATCH4Q5T3I0 446 aaKnown RBP14.59□□□□□ -0.07
TRA2A-209ENST00000494255 NFXL1Q6ZNB6 911 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 RASGRP2Q7LDG7 609 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 CATIPQ7Z7H3 387 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 ARHGAP39Q9C0H5 1083 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 CWC22Q9HCG8 908 aaKnown RBP14.59□□□□□ -0.07
TRA2A-209ENST00000494255 BTBD7Q9P203 1132 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 ADAMTS5Q9UNA0 930 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 TRIM17Q9Y577 477 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 MGAMO43451 1857 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 WDR19Q8NEZ3 1342 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 A0A0G2JMZ2 1700 aa14.59□□□□□ -0.07
TRA2A-209ENST00000494255 CCDC69A6NI79 296 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 SH2B2O14492 632 aaPredicted RBP14.58□□□□□ -0.07
TRA2A-209ENST00000494255 PEX10O60683 326 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 CNMDO75829 334 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 SNHG28P0DPA3 235 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 FDX1P10109 184 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 HOXD10P28358 340 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 MAPK4P31152 587 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 FGD1P98174 961 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 ASPRV1Q53RT3 343 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 BLOC1S2Q6QNY1 142 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 OTOP1Q7RTM1 612 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 LY9Q9HBG7 655 aa14.58□□□□□ -0.07
TRA2A-209ENST00000494255 TNPO2O14787 897 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms