RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 SHCBP1Q8NEM2 672 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 SPATC1LQ9H0A9 340 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 ZNFX1Q9P2E3 1918 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 RANBP2P49792 3224 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 PFASO15067 1338 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 MSCO60682 206 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 ERCC3P19447 782 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 CNGA1P29973 690 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 TDO2P48775 406 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 TMEM132BQ14DG7 1078 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 NCAPG2Q86XI2 1143 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 REPS2Q8NFH8 660 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 FSD1Q9BTV5 496 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 NACAP1Q9BZK3 213 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 MROH8Q9H579 483 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 ADAMTS5Q9UNA0 930 aa16■□□□□ 0.15
CTDSP1-212ENST00000494067 PLXNA1Q9UIW2 1896 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 PATL2C9JE40 543 aaKnown RBP15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 COBLO75128 1261 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 HOXC6P09630 235 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 CYP2C19P33261 490 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 PDE1AP54750 535 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 FAM83BQ5T0W9 1011 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 ZNF444Q8N0Y2 327 aaPredicted RBP15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 PRO3102Q9H379 93 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 INCENPQ9NQS7 918 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 STAP2Q9UGK3 403 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 SZT2Q5T011 3432 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 CEP290O15078 2479 aa15.99■□□□□ 0.15
CTDSP1-212ENST00000494067 SLC25A27O95847 323 aa15.98■□□□□ 0.15
CTDSP1-212ENST00000494067 IGHDP01880 384 aa15.98■□□□□ 0.15
CTDSP1-212ENST00000494067 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-212ENST00000494067 ADORA2AP29274 412 aa15.98■□□□□ 0.15
CTDSP1-212ENST00000494067 FXR1P51114 621 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTDSP1-212ENST00000494067 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
CTDSP1-212ENST00000494067 RBM27Q9P2N5 1060 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-212ENST00000494067 FCER1AP12319 257 aa15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 COPB2P35606 906 aa15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 C7orf61Q8IZ16 206 aa15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 ABRAQ8N0Z2 381 aa15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 NYAP2Q9P242 653 aa15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 ZNF214Q9UL59 606 aaPredicted RBP15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 CTDP1Q9Y5B0 961 aaPredicted RBP15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 PLIN4Q96Q06 1357 aa15.97■□□□□ 0.15
CTDSP1-212ENST00000494067 A0A0D9SFI3 127 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 A0A1W2PPC1 479 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 NDUFB10O96000 172 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 COL6A1P12109 1028 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 PDE4BQ07343 736 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 FAM47AQ5JRC9 791 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 OLFML2BQ68BL8 750 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 RASGRP2Q7LDG7 609 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 DDX20Q9UHI6 824 aaKnown RBP15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 PPP1R9AQ9ULJ8 1098 aa15.96■□□□□ 0.15
CTDSP1-212ENST00000494067 F5H6K3 240 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 VWA5AO00534 786 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 CYBAP13498 195 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 CTDSPL2Q05D32 466 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 KLRC3Q07444 240 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 PPARAQ07869 468 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 LRRC47Q8N1G4 583 aaKnown RBP15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 NAPBQ9H115 298 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 MTMR4Q9NYA4 1195 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.95■□□□□ 0.14
CTDSP1-212ENST00000494067 STAT3P40763 770 aa15.94■□□□□ 0.14
CTDSP1-212ENST00000494067 KCTD2Q14681 263 aa15.94■□□□□ 0.14
CTDSP1-212ENST00000494067 PRAMEF19Q5SWL8 479 aa15.94■□□□□ 0.14
CTDSP1-212ENST00000494067 B4GALNT3Q6L9W6 998 aa15.94■□□□□ 0.14
CTDSP1-212ENST00000494067 ZNF589Q86UQ0 364 aaPredicted RBP15.94■□□□□ 0.14
CTDSP1-212ENST00000494067 MMP19Q99542 508 aa15.94■□□□□ 0.14
CTDSP1-212ENST00000494067 RIPK3Q9Y572 518 aa15.94■□□□□ 0.14
CTDSP1-212ENST00000494067 NMT2O60551 498 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 PGK2P07205 417 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 PPP4R3BQ5MIZ7 849 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 ANO1Q5XXA6 986 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 RIOX2Q8IUF8 465 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 ARRDC4Q8NCT1 418 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 MKL1Q969V6 931 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 SENP6Q9GZR1 1112 aaPredicted RBP15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 IL17RBQ9NRM6 502 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 ZMYND8Q9ULU4 1186 aaPredicted RBP15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 DNAH12Q6ZR08 3092 aa15.93■□□□□ 0.14
CTDSP1-212ENST00000494067 AAMPQ13685 434 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 LRRC26Q2I0M4 334 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 PRPF38AQ8NAV1 312 aaKnown RBP15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 NEDD1Q8NHV4 660 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 CHMP4CQ96CF2 233 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 EVI5LQ96CN4 794 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 MAML3Q96JK9 1138 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms