RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.05■□□□□ -03e-6■■■■□ 25
HSPG2-212ENST00000493940 NYAP2Q9P242 653 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
HSPG2-212ENST00000493940 LAMA4Q16363 1823 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 F5H6K3 240 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 WDR46O15213 610 aaKnown RBP15.04■□□□□ -0
HSPG2-212ENST00000493940 NMT2O60551 498 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 NDUFB10O96000 172 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 CCND3P30281 292 aaPredicted RBP15.04■□□□□ -0
HSPG2-212ENST00000493940 KLRC3Q07444 240 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 WDR78Q5VTH9 848 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 RASGRP2Q7LDG7 609 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
HSPG2-212ENST00000493940 REPS2Q8NFH8 660 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 RILPL2Q969X0 211 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 CHMP4CQ96CF2 233 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 NAPBQ9H115 298 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 IL17RBQ9NRM6 502 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 HELLSQ9NRZ9 838 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 MTMR4Q9NYA4 1195 aa15.04■□□□□ -0
HSPG2-212ENST00000493940 RPTORQ8N122 1335 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 TRIM6-TRIM34B2RNG4 842 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 RAD21O60216 631 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 COBLO75128 1261 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 FGAP02671 866 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 TFRCP02786 760 aaKnown RBP15.03■□□□□ -0
HSPG2-212ENST00000493940 HSPD1P10809 573 aaKnown RBP15.03■□□□□ -0
HSPG2-212ENST00000493940 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
HSPG2-212ENST00000493940 ERCC3P19447 782 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 TFAP4Q01664 338 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 GRB14Q14449 540 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 LRRFIP1Q32MZ4 808 aaKnown RBP15.03■□□□□ -0
HSPG2-212ENST00000493940 NEDD1Q8NHV4 660 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 MKL1Q969V6 931 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 NBPF3Q9H094 633 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 IL25Q9H293 177 aa15.03■□□□□ -0
HSPG2-212ENST00000493940 PLIN4Q96Q06 1357 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 SDSP20132 328 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 ALX1Q15699 326 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 MCMDC2Q4G0Z9 681 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 LHX8Q68G74 356 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 LRRC47Q8N1G4 583 aaKnown RBP15.02■□□□□ -0
HSPG2-212ENST00000493940 TRPV1Q8NER1 839 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 SOCS4Q8WXH5 440 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 NACAP1Q9BZK3 213 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 HMX1Q9NP08 348 aaPredicted RBP15.02■□□□□ -0
HSPG2-212ENST00000493940 ANAPC4Q9UJX5 808 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 PPP1R9AQ9ULJ8 1098 aa15.02■□□□□ -0
HSPG2-212ENST00000493940 LCTP09848 1927 aa15.02□□□□□ -0.01
HSPG2-212ENST00000493940 TRIOBPQ9H2D6 2365 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 VWA5AO00534 786 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 HOXC6P09630 235 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 RGS2P41220 211 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 CCNA1P78396 465 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 PLS1Q14651 629 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 CCAR1Q8IX12 1150 aaKnown RBP15.01□□□□□ -0.01
HSPG2-212ENST00000493940 PAWRQ96IZ0 340 aaKnown RBP15.01□□□□□ -0.01
HSPG2-212ENST00000493940 APBA2Q99767 749 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 SH2D4AQ9H788 454 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 GOPCQ9HD26 462 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 ZNF214Q9UL59 606 aaPredicted RBP15.01□□□□□ -0.01
HSPG2-212ENST00000493940 RIPK3Q9Y572 518 aa15.01□□□□□ -0.01
HSPG2-212ENST00000493940 SZT2Q5T011 3432 aa15□□□□□ -0.01
HSPG2-212ENST00000493940 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
HSPG2-212ENST00000493940 FGRP09769 529 aa15□□□□□ -0.01
HSPG2-212ENST00000493940 ZKSCAN1P17029 563 aaPredicted RBP15□□□□□ -0.01
HSPG2-212ENST00000493940 ADORA2AP29274 412 aa15□□□□□ -0.01
HSPG2-212ENST00000493940 CYP2C19P33261 490 aa15□□□□□ -0.01
HSPG2-212ENST00000493940 HAND2P61296 217 aa15□□□□□ -0.01
HSPG2-212ENST00000493940 NCAPG2Q86XI2 1143 aa15□□□□□ -0.01
HSPG2-212ENST00000493940 TSPY3P0CV98 308 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 TSPY8P0CW00 308 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 GSPT1P15170 499 aaKnown RBP14.99□□□□□ -0.01
HSPG2-212ENST00000493940 PDE4BQ07343 736 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 PRAMEF19Q5SWL8 479 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 CHRDL2Q6WN34 429 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 MB21D1Q8N884 522 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 SHCBP1Q8NEM2 672 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 OGDHLQ9ULD0 1010 aa14.99□□□□□ -0.01
HSPG2-212ENST00000493940 CCDC171Q6TFL3 1326 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 MYH6P13533 1939 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 TTLL1O95922 423 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 PGK2P07205 417 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 NOVP48745 357 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
HSPG2-212ENST00000493940 RIOX2Q8IUF8 465 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 TBC1D10CQ8IV04 446 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 DPF3Q92784 378 aa14.98□□□□□ -0.01
HSPG2-212ENST00000493940 CWC22Q9HCG8 908 aaKnown RBP14.98□□□□□ -0.01
HSPG2-212ENST00000493940 ORC4O43929 436 aa14.97□□□□□ -0.01
HSPG2-212ENST00000493940 RANBP6O60518 1105 aaKnown RBP14.97□□□□□ -0.01
HSPG2-212ENST00000493940 STAT3P40763 770 aa14.97□□□□□ -0.01
HSPG2-212ENST00000493940 SLFN13Q68D06 897 aa14.97□□□□□ -0.01
HSPG2-212ENST00000493940 SKAP1Q86WV1 359 aa14.97□□□□□ -0.01
HSPG2-212ENST00000493940 GMCL1P1Q8NEA9 526 aa14.97□□□□□ -0.01
HSPG2-212ENST00000493940 SLF1Q9BQI6 1058 aa14.97□□□□□ -0.01
HSPG2-212ENST00000493940 PRO3102Q9H379 93 aa14.97□□□□□ -0.01
HSPG2-212ENST00000493940 RBM27Q9P2N5 1060 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms