RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 USP6NLQ92738 828 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 DSCC1Q9BVC3 393 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 SPATC1LQ9H0A9 340 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 PPP1R9AQ9ULJ8 1098 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 RAD50Q92878 1312 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 RANBP6O60518 1105 aaKnown RBP26.8■■□□□ 1.88
SNIP1-203ENST00000493916 SHCBP1Q8NEM2 672 aa26.8■■□□□ 1.88
SNIP1-203ENST00000493916 NBPF3Q9H094 633 aa26.8■■□□□ 1.88
SNIP1-203ENST00000493916 CWC22Q9HCG8 908 aaKnown RBP26.8■■□□□ 1.88
SNIP1-203ENST00000493916 FBXO28Q9NVF7 368 aa26.8■■□□□ 1.88
SNIP1-203ENST00000493916 CCL5P13501 91 aa26.79■■□□□ 1.88
SNIP1-203ENST00000493916 NOVP48745 357 aa26.79■■□□□ 1.88
SNIP1-203ENST00000493916 HAND2P61296 217 aa26.79■■□□□ 1.88
SNIP1-203ENST00000493916 LRRC47Q8N1G4 583 aaKnown RBP26.79■■□□□ 1.88
SNIP1-203ENST00000493916 STAG1Q8WVM7 1258 aa26.79■■□□□ 1.88
SNIP1-203ENST00000493916 NUP88Q99567 741 aaPredicted RBP26.79■■□□□ 1.88
SNIP1-203ENST00000493916 MOV10L1Q9BXT6 1211 aaKnown RBP26.79■■□□□ 1.88
SNIP1-203ENST00000493916 IL17RBQ9NRM6 502 aa26.79■■□□□ 1.88
SNIP1-203ENST00000493916 HMGCRP04035 888 aa26.78■■□□□ 1.88
SNIP1-203ENST00000493916 EN2P19622 333 aaPredicted RBP26.78■■□□□ 1.88
SNIP1-203ENST00000493916 RGS2P41220 211 aa26.78■■□□□ 1.88
SNIP1-203ENST00000493916 AKNAD1Q5T1N1 836 aa26.78■■□□□ 1.88
SNIP1-203ENST00000493916 TRMT44Q8IYL2 757 aaKnown RBP26.78■■□□□ 1.88
SNIP1-203ENST00000493916 IL25Q9H293 177 aa26.78■■□□□ 1.88
SNIP1-203ENST00000493916 ZNF236Q9UL36 1845 aa26.78■■□□□ 1.88
SNIP1-203ENST00000493916 SLC15A5A6NIM6 579 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 VWA5AO00534 786 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 CYP2B6P20813 491 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 PTPREP23469 700 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 GRB14Q14449 540 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 TBC1D10CQ8IV04 446 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 APBA2Q99767 749 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 SLF1Q9BQI6 1058 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 RNF41Q9H4P4 317 aaPredicted RBP26.77■■□□□ 1.88
SNIP1-203ENST00000493916 TOMM22Q9NS69 142 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 IVNS1ABPQ9Y6Y0 642 aa26.77■■□□□ 1.88
SNIP1-203ENST00000493916 ZNF213O14771 459 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 NMT2O60551 498 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 CHMLP26374 656 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 NT5C2P49902 561 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 MAP2K5Q13163 448 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 TMEM132BQ14DG7 1078 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 WDR78Q5VTH9 848 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 MFSD6Q6ZSS7 791 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 RUFY2Q8WXA3 655 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 TRIB2Q92519 343 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 RNF208Q9H0X6 261 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 UNC93B1Q9H1C4 597 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 STX8Q9UNK0 236 aa26.76■■□□□ 1.87
SNIP1-203ENST00000493916 GJB1P08034 283 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 ERCC3P19447 782 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 RRP12Q5JTH9 1297 aaKnown RBP26.75■■□□□ 1.87
SNIP1-203ENST00000493916 SLFN13Q68D06 897 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 SAMD1Q6SPF0 538 aaPredicted RBP26.75■■□□□ 1.87
SNIP1-203ENST00000493916 REPS2Q8NFH8 660 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 NKX2-3Q8TAU0 364 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 GMCL1Q96IK5 515 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 MROH8Q9H579 483 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 TCP11L1Q9NUJ3 509 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 CTNNA3Q9UI47 895 aa26.75■■□□□ 1.87
SNIP1-203ENST00000493916 COL11A1P12107 1806 aaPredicted RBP26.74■■□□□ 1.87
SNIP1-203ENST00000493916 PLS1Q14651 629 aa26.74■■□□□ 1.87
SNIP1-203ENST00000493916 PRPF38AQ8NAV1 312 aaKnown RBP26.74■■□□□ 1.87
SNIP1-203ENST00000493916 FEM1BQ9UK73 627 aa26.74■■□□□ 1.87
SNIP1-203ENST00000493916 KIAA0100Q14667 2235 aaKnown RBP26.74■■□□□ 1.87
SNIP1-203ENST00000493916 STRNO43815 780 aa26.73■■□□□ 1.87
SNIP1-203ENST00000493916 SLC25A27O95847 323 aa26.73■■□□□ 1.87
SNIP1-203ENST00000493916 HOXC6P09630 235 aa26.73■■□□□ 1.87
SNIP1-203ENST00000493916 BMP3P12645 472 aa26.73■■□□□ 1.87
SNIP1-203ENST00000493916 ZKSCAN1P17029 563 aaPredicted RBP26.73■■□□□ 1.87
SNIP1-203ENST00000493916 GJA8P48165 433 aa26.73■■□□□ 1.87
SNIP1-203ENST00000493916 PAK6Q9NQU5 681 aaPredicted RBP26.73■■□□□ 1.87
SNIP1-203ENST00000493916 ZNF214Q9UL59 606 aaPredicted RBP26.73■■□□□ 1.87
SNIP1-203ENST00000493916 MKI67P46013 3256 aaKnown RBP26.72■■□□□ 1.87
SNIP1-203ENST00000493916 NEDD4P46934 1319 aa26.72■■□□□ 1.87
SNIP1-203ENST00000493916 IMMTQ16891 758 aaKnown RBP26.72■■□□□ 1.87
SNIP1-203ENST00000493916 RIOX2Q8IUF8 465 aa26.72■■□□□ 1.87
SNIP1-203ENST00000493916 ABRAQ8N0Z2 381 aa26.72■■□□□ 1.87
SNIP1-203ENST00000493916 SHISA4Q96DD7 197 aa26.72■■□□□ 1.87
SNIP1-203ENST00000493916 COPB2P35606 906 aa26.71■■□□□ 1.87
SNIP1-203ENST00000493916 MAP3K21Q5TCX8 1036 aa26.71■■□□□ 1.87
SNIP1-203ENST00000493916 NCAPG2Q86XI2 1143 aa26.71■■□□□ 1.87
SNIP1-203ENST00000493916 ESR2Q92731 530 aa26.71■■□□□ 1.87
SNIP1-203ENST00000493916 CAPN2P17655 700 aa26.7■■□□□ 1.86
SNIP1-203ENST00000493916 STAT3P40763 770 aa26.7■■□□□ 1.86
SNIP1-203ENST00000493916 SLC1A4P43007 532 aa26.7■■□□□ 1.86
SNIP1-203ENST00000493916 TRIM32Q13049 653 aa26.7■■□□□ 1.86
SNIP1-203ENST00000493916 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.7■■□□□ 1.86
SNIP1-203ENST00000493916 RPTORQ8N122 1335 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 ATP2A1O14983 1001 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 SGSM2O43147 1006 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 PLA2G6O60733 806 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 TOP1P11387 765 aaKnown RBP26.69■■□□□ 1.86
SNIP1-203ENST00000493916 ADORA2AP29274 412 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 CCL14Q16627 93 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 U2AF1L4Q8WU68 220 aaKnown RBP26.69■■□□□ 1.86
SNIP1-203ENST00000493916 TEX13BQ9BXU2 312 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 SLC38A10Q9HBR0 1119 aa26.69■■□□□ 1.86
SNIP1-203ENST00000493916 ZBED4O75132 1171 aa26.68■■□□□ 1.86
SNIP1-203ENST00000493916 SGPL1O95470 568 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms