RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SMTNL1A8MU46 457 aa15.71■□□□□ 0.11
VCP-207ENST00000493886 CTIFO43310 598 aaKnown RBP15.71■□□□□ 0.11
VCP-207ENST00000493886 PTPN21Q16825 1174 aa15.71■□□□□ 0.11
VCP-207ENST00000493886 DDX60LQ5H9U9 1706 aaKnown RBP15.71■□□□□ 0.11
VCP-207ENST00000493886 CSRNP2Q9H175 543 aa15.71■□□□□ 0.11
VCP-207ENST00000493886 POLR2DO15514 142 aaKnown RBP15.71■□□□□ 0.1
VCP-207ENST00000493886 BMP15O95972 392 aa15.71■□□□□ 0.1
VCP-207ENST00000493886 GNAQP50148 359 aa15.71■□□□□ 0.1
VCP-207ENST00000493886 OLFM4Q6UX06 510 aa15.71■□□□□ 0.1
VCP-207ENST00000493886 FOXP4Q8IVH2 680 aaPredicted RBP15.71■□□□□ 0.1
VCP-207ENST00000493886 TMEM47Q9BQJ4 181 aa15.71■□□□□ 0.1
VCP-207ENST00000493886 MAD2L2Q9UI95 211 aa15.71■□□□□ 0.1
VCP-207ENST00000493886 STX8Q9UNK0 236 aa15.71■□□□□ 0.1
VCP-207ENST00000493886 DAGLAQ9Y4D2 1042 aa15.71■□□□□ 0.1
VCP-207ENST00000493886 WNT7AO00755 349 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 EP400NLQ6ZTU2 488 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 ANKRD7Q92527 254 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 EYA3Q99504 573 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 ZC3H12CQ9C0D7 883 aaKnown RBP15.7■□□□□ 0.1
VCP-207ENST00000493886 HOOK1Q9UJC3 728 aaKnown RBP15.7■□□□□ 0.1
VCP-207ENST00000493886 PCDHA5Q9Y5H7 936 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 SNED1Q8TER0 1413 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 FOXN1O15353 648 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 MMP10P09238 476 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 MDM2Q00987 491 aaPredicted RBP15.7■□□□□ 0.1
VCP-207ENST00000493886 TTC38Q5R3I4 469 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 ZNF772Q68DY9 489 aaPredicted RBP15.7■□□□□ 0.1
VCP-207ENST00000493886 SERTAD1Q9UHV2 236 aa15.7■□□□□ 0.1
VCP-207ENST00000493886 MYH1P12882 1939 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 PDE6BP35913 854 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 CCZ1BP86790 482 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 CCZ1P86791 482 aaPredicted RBP15.69■□□□□ 0.1
VCP-207ENST00000493886 NCAPHQ15003 741 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 ZNF174Q15697 407 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 GRIPAP1Q4V328 841 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 USP49Q70CQ1 688 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 FLAD1Q8NFF5 587 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 PARP3Q9Y6F1 533 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 TMC6Q7Z403 805 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 NEDD1Q8NHV4 660 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 IFNKQ9P0W0 207 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 MTMR7Q9Y216 660 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 SUGT1Q9Y2Z0 365 aa15.69■□□□□ 0.1
VCP-207ENST00000493886 IKBKBO14920 756 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 CALML3P27482 149 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 TPM4P67936 248 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 POSTNQ15063 836 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 PTPN14Q15678 1187 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 DPP8Q6V1X1 898 aaPredicted RBP15.68■□□□□ 0.1
VCP-207ENST00000493886 PIK3AP1Q6ZUJ8 805 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 PDILTQ8N807 584 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 FERMT2Q96AC1 680 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 XPO4Q9C0E2 1151 aaKnown RBP15.68■□□□□ 0.1
VCP-207ENST00000493886 SH3GLB2Q9NR46 395 aa15.68■□□□□ 0.1
VCP-207ENST00000493886 F8W031 263 aaPredicted RBP15.68■□□□□ 0.1
VCP-207ENST00000493886 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
VCP-207ENST00000493886 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
VCP-207ENST00000493886 GPKOWQ92917 476 aaPredicted RBP eCLIP15.68■□□□□ 0.1
VCP-207ENST00000493886 ADAMTS3O15072 1205 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 TRAPPC10P48553 1259 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 SLC35G1Q2M3R5 365 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 MASTLQ96GX5 879 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 PALM3A6NDB9 673 aaPredicted RBP15.67■□□□□ 0.1
VCP-207ENST00000493886 ACTN4O43707 911 aaKnown RBP15.67■□□□□ 0.1
VCP-207ENST00000493886 DOK7Q18PE1 504 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 BLIDQ8IZY5 108 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 FOCADQ5VW36 1801 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 CYTH3O43739 400 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 ATP2C1P98194 919 aaPredicted RBP15.67■□□□□ 0.1
VCP-207ENST00000493886 KANK3Q6NY19 840 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 ZNF622Q969S3 477 aaKnown RBP eCLIP15.67■□□□□ 0.17e-8■■■□□ 16.9
VCP-207ENST00000493886 EPSTI1Q96J88 318 aa15.67■□□□□ 0.1
VCP-207ENST00000493886 ZNF215Q9UL58 517 aaPredicted RBP15.67■□□□□ 0.1
VCP-207ENST00000493886 COL11A2P13942 1736 aaPredicted RBP15.66■□□□□ 0.1
VCP-207ENST00000493886 PTGDRQ13258 359 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 HSP90AA4PQ58FG1 418 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 TMX4Q9H1E5 349 aaPredicted RBP15.66■□□□□ 0.1
VCP-207ENST00000493886 PCDHA4Q9UN74 947 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 TTF2Q9UNY4 1162 aaKnown RBP15.66■□□□□ 0.1
VCP-207ENST00000493886 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 PICALMQ13492 652 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 TYW1BQ6NUM6 668 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 SYMPKQ92797 1274 aaKnown RBP15.66■□□□□ 0.1
VCP-207ENST00000493886 LZTS2Q9BRK4 669 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 MAN1B1Q9UKM7 699 aa15.66■□□□□ 0.1
VCP-207ENST00000493886 GOLGA8HP0CJ92 632 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 BMP6P22004 513 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 MYL5Q02045 173 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 NT5DC1Q5TFE4 455 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 GRAMD1CQ8IYS0 662 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 CEP95Q96GE4 821 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 MXD3Q9BW11 206 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 A0A087X0B3 334 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 SARSP49591 514 aaKnown RBP15.65■□□□□ 0.1
VCP-207ENST00000493886 WWC2Q6AWC2 1192 aa15.65■□□□□ 0.1
VCP-207ENST00000493886 CCAR2Q8N163 923 aaKnown RBP15.65■□□□□ 0.1
VCP-207ENST00000493886 SMARCE1Q969G3 411 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms