RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 GADD45BO75293 160 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-216ENST00000493864 IGKV5-2P06315 115 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 TAGLNQ01995 201 aaKnown RBP8.22□□□□□ -1.09
TRA2B-216ENST00000493864 CWF19L2Q2TBE0 894 aaKnown RBP8.22□□□□□ -1.09
TRA2B-216ENST00000493864 CEP135Q66GS9 1140 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 KANK3Q6NY19 840 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 PI16Q6UXB8 463 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 KIF6Q6ZMV9 814 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 C8orf86Q6ZUL3 223 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 NPM2Q86SE8 214 aaKnown RBP8.22□□□□□ -1.09
TRA2B-216ENST00000493864 LINS1Q8NG48 757 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 GIPC2Q8TF65 315 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 ZKSCAN3Q9BRR0 538 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 PBX4Q9BYU1 374 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 SRCIN1Q9C0H9 1055 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 DZANK1Q9NVP4 752 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 DDX19BQ9UMR2 479 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 COL5A3P25940 1745 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-216ENST00000493864 MAP3K15Q6ZN16 1313 aa8.22□□□□□ -1.09
TRA2B-216ENST00000493864 C4BP0C0L5 1744 aa8.21□□□□□ -1.09
TRA2B-216ENST00000493864 A0A087WZG4 1122 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 A0A1W2PP55 124 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 ERVV-1B6SEH8 477 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 PRPF40AO75400 957 aaKnown RBP8.21□□□□□ -1.1
TRA2B-216ENST00000493864 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
TRA2B-216ENST00000493864 CAMTA2O94983 1202 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 ARHGEF15O94989 841 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 TCIRG1Q13488 830 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.21□□□□□ -1.1
TRA2B-216ENST00000493864 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 ERICH6BQ5W0A0 696 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 C20orf204Q6ZNR8 217 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 FBF1Q8TES7 1133 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 JARID2Q92833 1246 aaPredicted RBP8.21□□□□□ -1.1
TRA2B-216ENST00000493864 HHIPQ96QV1 700 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 USP44Q9H0E7 712 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 ZBTB40Q9NUA8 1239 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 FRRS1LQ9P0K9 344 aa8.21□□□□□ -1.1
TRA2B-216ENST00000493864 SRP68Q9UHB9 627 aaKnown RBP8.21□□□□□ -1.1
TRA2B-216ENST00000493864 LILRB5O75023 590 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 ALDH1L1O75891 902 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 ZBTB7AO95365 584 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 GPTP24298 496 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 NEXNQ0ZGT2 675 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 SLC15A2Q16348 729 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 GDF6Q6KF10 455 aaPredicted RBP8.2□□□□□ -1.1
TRA2B-216ENST00000493864 MEIS3Q99687 375 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 DUSP9Q99956 384 aaKnown RBP8.2□□□□□ -1.1
TRA2B-216ENST00000493864 ISCA1Q9BUE6 129 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 EHD4Q9H223 541 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 PPP4R2Q9NY27 417 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 STK32BQ9NY57 414 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 NARFQ9UHQ1 456 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 COL15A1P39059 1388 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
TRA2B-216ENST00000493864 PDE2AO00408 941 aaPredicted RBP8.19□□□□□ -1.1
TRA2B-216ENST00000493864 HMGB2P26583 209 aaKnown RBP8.19□□□□□ -1.1
TRA2B-216ENST00000493864 RFC4P35249 363 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 FGD1P98174 961 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 TRIM28Q13263 835 aaKnown RBP8.19□□□□□ -1.1
TRA2B-216ENST00000493864 GCKRQ14397 625 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 ZNF34Q8IZ26 560 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 POP1Q99575 1024 aaKnown RBP8.19□□□□□ -1.1
TRA2B-216ENST00000493864 LACRTQ9GZZ8 138 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 RNF19AQ9NV58 838 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 C9orf78Q9NZ63 289 aaPredicted RBP8.19□□□□□ -1.1
TRA2B-216ENST00000493864 TFCP2L1Q9NZI6 479 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 TRIM33Q9UPN9 1127 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 ATP10DQ9P241 1426 aa8.19□□□□□ -1.1
TRA2B-216ENST00000493864 NFKBIEO00221 500 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 GNAI3P08754 354 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 NBPF7P0C2Y1 421 aaPredicted RBP8.18□□□□□ -1.1
TRA2B-216ENST00000493864 DGKGP49619 791 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 AFF1P51825 1210 aaKnown RBP8.18□□□□□ -1.1
TRA2B-216ENST00000493864 HSP90AB3PQ58FF7 597 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 CLEC4GQ6UXB4 293 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 NLRP10Q86W26 655 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 COL23A1Q86Y22 540 aaPredicted RBP8.18□□□□□ -1.1
TRA2B-216ENST00000493864 CCDC191Q8NCU4 936 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 TTC9Q92623 222 aa8.18□□□□□ -1.1
TRA2B-216ENST00000493864 CHMP4BQ9H444 224 aaKnown RBP8.18□□□□□ -1.1
TRA2B-216ENST00000493864 CWC25Q9NXE8 425 aaPredicted RBP8.18□□□□□ -1.1
TRA2B-216ENST00000493864 C4AP0C0L4 1744 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 ARFGEF2Q9Y6D5 1785 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 FAM177BA6PVY3 158 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 GRM8O00222 908 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 GNAI2P04899 355 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 UBTFL1P0CB47 393 aaPredicted RBP8.17□□□□□ -1.1
TRA2B-216ENST00000493864 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
TRA2B-216ENST00000493864 SNRPNP63162 240 aaKnown RBP8.17□□□□□ -1.1
TRA2B-216ENST00000493864 GRM2Q14416 872 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 GRIK5Q16478 980 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 SUSD4Q5VX71 490 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 TBC1D9BQ66K14 1250 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 SYNE4Q8N205 404 aa8.17□□□□□ -1.1
TRA2B-216ENST00000493864 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
TRA2B-216ENST00000493864 NXPE3Q969Y0 559 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms