RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 A0A1W2PQH9 124 aa7.04□□□□□ -1.28
ITGB1-216ENST00000493758 PAPLNO95428 1278 aa7.04□□□□□ -1.28
ITGB1-216ENST00000493758 GDNFP39905 211 aa7.04□□□□□ -1.28
ITGB1-216ENST00000493758 ZC3H6P61129 1189 aaKnown RBP7.04□□□□□ -1.28
ITGB1-216ENST00000493758 AUHQ13825 339 aaKnown RBP7.04□□□□□ -1.28
ITGB1-216ENST00000493758 RNF111Q6ZNA4 994 aa7.04□□□□□ -1.28
ITGB1-216ENST00000493758 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
ITGB1-216ENST00000493758 C19orf73Q9NVV2 129 aa7.04□□□□□ -1.28
ITGB1-216ENST00000493758 CTNND2Q9UQB3 1225 aa7.04□□□□□ -1.28
ITGB1-216ENST00000493758 C9IYK1 514 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 RBAK-RBAKDNI3L0D1 243 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 BIN1O00499 593 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 TNNI3KQ59H18 835 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 TMC3Q7Z5M5 1100 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 C7orf61Q8IZ16 206 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 FAM169BQ8N8A8 192 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 LINC00116Q8NCU8 138 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 TMEM59LQ9UK28 342 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 PCDHA11Q9Y5I1 949 aa7.03□□□□□ -1.28
ITGB1-216ENST00000493758 LTBP3Q9NS15 1303 aa7.02□□□□□ -1.28
ITGB1-216ENST00000493758 PRAMEF1O95521 474 aa7.02□□□□□ -1.29
ITGB1-216ENST00000493758 ENDOUP21128 410 aaKnown RBP7.02□□□□□ -1.29
ITGB1-216ENST00000493758 LTKP29376 864 aa7.02□□□□□ -1.29
ITGB1-216ENST00000493758 TEKQ02763 1124 aa7.02□□□□□ -1.29
ITGB1-216ENST00000493758 ARID5AQ03989 594 aa7.02□□□□□ -1.29
ITGB1-216ENST00000493758 SNW1Q13573 536 aaKnown RBP7.02□□□□□ -1.29
ITGB1-216ENST00000493758 CREG2Q8IUH2 290 aa7.02□□□□□ -1.29
ITGB1-216ENST00000493758 CPLX3Q8WVH0 158 aa7.02□□□□□ -1.29
ITGB1-216ENST00000493758 ZNF512BQ96KM6 892 aaPredicted RBP7.02□□□□□ -1.29
ITGB1-216ENST00000493758 WASH4PA8MWX3 477 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 CBFA2T2O43439 604 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 TAL1P17542 331 aaPredicted RBP7.01□□□□□ -1.29
ITGB1-216ENST00000493758 EGR3Q06889 387 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 CLEC16AQ2KHT3 1053 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 MCF2L2Q86YR7 1114 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 PRDM7Q9NQW5 492 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 CHST7Q9NS84 486 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 PRKAG3Q9UGI9 489 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 FHOD1Q9Y613 1164 aa7.01□□□□□ -1.29
ITGB1-216ENST00000493758 A0A087WZG4 1122 aa7□□□□□ -1.29
ITGB1-216ENST00000493758 BMP8BP34820 402 aa7□□□□□ -1.29
ITGB1-216ENST00000493758 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
ITGB1-216ENST00000493758 KLHL6Q8WZ60 621 aa7□□□□□ -1.29
ITGB1-216ENST00000493758 TCTN2Q96GX1 697 aa7□□□□□ -1.29
ITGB1-216ENST00000493758 BUD13Q9BRD0 619 aaKnown RBP eCLIP7□□□□□ -1.29
ITGB1-216ENST00000493758 ZNF205O95201 554 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 ZGLP1P0C6A0 271 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 ZNF143P52747 638 aaPredicted RBP6.99□□□□□ -1.29
ITGB1-216ENST00000493758 PCBP3P57721 371 aaKnown RBP6.99□□□□□ -1.29
ITGB1-216ENST00000493758 NR0B2Q15466 257 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 DHX38Q92620 1227 aaKnown RBP6.99□□□□□ -1.29
ITGB1-216ENST00000493758 FMNL2Q96PY5 1086 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 HAUS7Q99871 368 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 KLHL25Q9H0H3 589 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 GP6Q9HCN6 339 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 SLAMF8Q9P0V8 285 aa6.99□□□□□ -1.29
ITGB1-216ENST00000493758 DNAJC25-GNG10A0A024R161 153 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 TMEM82A0PJX8 343 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 HPXP02790 462 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 SSBP05455 408 aaKnown RBP eCLIP6.98□□□□□ -1.29
ITGB1-216ENST00000493758 GSNP06396 782 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 CTSKP43235 329 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 SLC7A5Q01650 507 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 DUSP4Q13115 394 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 NCAPHQ15003 741 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 RALGPS1Q5JS13 557 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 TDRD10Q5VZ19 366 aaKnown RBP6.98□□□□□ -1.29
ITGB1-216ENST00000493758 USHBP1Q8N6Y0 703 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 PDZD8Q8NEN9 1154 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 LINC01599Q8WXQ3 324 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 ANAPC16Q96DE5 110 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 G6PC3Q9BUM1 346 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 GFOD1Q9NXC2 390 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 WHRNQ9P202 907 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 TCFL5Q9UL49 500 aa6.98□□□□□ -1.29
ITGB1-216ENST00000493758 FAM86C2PA6NEL3 165 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 ITGA4P13612 1032 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 CD247P20963 164 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 AFMP43652 599 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 CHRNEQ04844 493 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 DCAF15Q66K64 600 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 ANKS4BQ8N8V4 417 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 ASIC4Q96FT7 647 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 ZNF408Q9H9D4 720 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 SP110Q9HB58 689 aa6.97□□□□□ -1.29
ITGB1-216ENST00000493758 FITM1A5D6W6 292 aa6.96□□□□□ -1.3
ITGB1-216ENST00000493758 ZNF445P59923 1031 aa6.96□□□□□ -1.3
ITGB1-216ENST00000493758 FCRL2Q96LA5 508 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-216ENST00000493758 GBP3Q9H0R5 595 aa6.96□□□□□ -1.3
ITGB1-216ENST00000493758 ACTR10Q9NZ32 417 aa6.96□□□□□ -1.3
ITGB1-216ENST00000493758 SUSD2Q9UGT4 822 aa6.96□□□□□ -1.3
ITGB1-216ENST00000493758 FBXL21Q9UKT6 434 aa6.96□□□□□ -1.3
ITGB1-216ENST00000493758 ZNF451Q9Y4E5 1061 aa6.96□□□□□ -1.3
ITGB1-216ENST00000493758 CARMIL2Q6F5E8 1435 aa6.95□□□□□ -1.3
ITGB1-216ENST00000493758 SMAD7O15105 426 aaKnown RBP6.95□□□□□ -1.3
ITGB1-216ENST00000493758 PAX4O43316 350 aa6.95□□□□□ -1.3
ITGB1-216ENST00000493758 RAC2P15153 192 aa6.95□□□□□ -1.3
ITGB1-216ENST00000493758 DNAJA1P31689 397 aaKnown RBP6.95□□□□□ -1.3
ITGB1-216ENST00000493758 KIR2DL1P43626 348 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms