RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 ZNF543Q08ER8 600 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 DCAF15Q66K64 600 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 KRT40Q6A162 431 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 WASF1Q92558 559 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 GBP4Q96PP9 640 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 ZNF341Q9BYN7 854 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 GPCPD1Q9NPB8 672 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 ZNF112Q9UJU3 913 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 MYH4Q9Y623 1939 aa21.84■■□□□ 1.09
NECTIN3-211ENST00000493615 TRAF5O00463 557 aa21.83■■□□□ 1.09
NECTIN3-211ENST00000493615 RAD21O60216 631 aa21.83■■□□□ 1.09
NECTIN3-211ENST00000493615 CTNND1O60716 968 aaKnown RBP21.83■■□□□ 1.09
NECTIN3-211ENST00000493615 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
NECTIN3-211ENST00000493615 NBR1Q14596 966 aa21.83■■□□□ 1.08
NECTIN3-211ENST00000493615 SLFN13Q68D06 897 aa21.83■■□□□ 1.08
NECTIN3-211ENST00000493615 MCTP1Q6DN14 999 aa21.83■■□□□ 1.08
NECTIN3-211ENST00000493615 TTBK2Q6IQ55 1244 aa21.83■■□□□ 1.08
NECTIN3-211ENST00000493615 KCTD1Q719H9 257 aa21.83■■□□□ 1.08
NECTIN3-211ENST00000493615 LZTS2Q9BRK4 669 aa21.83■■□□□ 1.08
NECTIN3-211ENST00000493615 NDUFB10O96000 172 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 SUPT20HL1Q3ZLR7 823 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 KIAA1755Q5JYT7 1200 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 SMC1BQ8NDV3 1235 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 GMCL1P1Q8NEA9 526 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 RBM46Q8TBY0 533 aaKnown RBP21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 ZKSCAN4Q969J2 545 aaPredicted RBP21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 HOOK2Q96ED9 719 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 SPZ1Q9BXG8 430 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 KCNJ14Q9UNX9 436 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 TMX2Q9Y320 296 aa21.82■■□□□ 1.08
NECTIN3-211ENST00000493615 PRKG1Q13976 671 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 CCDC96Q2M329 555 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 WRNIP1Q96S55 665 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 NUP88Q99567 741 aaPredicted RBP21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 ARHGEF10LQ9HCE6 1279 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 VPS54Q9P1Q0 977 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 ITGBL1O95965 494 aaPredicted RBP21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 SLC1A4P43007 532 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 DNM1Q05193 864 aaKnown RBP21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 PFKFB3Q16875 520 aaPredicted RBP21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 SPICE1Q8N0Z3 855 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 KLRG1Q96E93 195 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 VAT1LQ9HCJ6 419 aa21.81■■□□□ 1.08
NECTIN3-211ENST00000493615 KIF28PB7ZC32 967 aa21.8■■□□□ 1.08
NECTIN3-211ENST00000493615 SCG2P13521 617 aa21.8■■□□□ 1.08
NECTIN3-211ENST00000493615 SLC16A2P36021 539 aa21.8■■□□□ 1.08
NECTIN3-211ENST00000493615 GPATCH4Q5T3I0 446 aaKnown RBP21.8■■□□□ 1.08
NECTIN3-211ENST00000493615 DCAF4Q8WV16 495 aa21.8■■□□□ 1.08
NECTIN3-211ENST00000493615 RIOX1Q9H6W3 641 aa21.8■■□□□ 1.08
NECTIN3-211ENST00000493615 USP2O75604 605 aaPredicted RBP21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 SMARCA1P28370 1054 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 KIF23Q02241 960 aaPredicted RBP21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 TRIM29Q14134 588 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 RGS22Q8NE09 1264 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 GMCL1Q96IK5 515 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 ZSCAN16Q9H4T2 348 aaPredicted RBP21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 SYNPO2Q9UMS6 1093 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 ATP6V1DQ9Y5K8 247 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 CDCA5Q96FF9 252 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 ZNF408Q9H9D4 720 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 GDPD2Q9HCC8 539 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 CNPY2Q9Y2B0 182 aa21.79■■□□□ 1.08
NECTIN3-211ENST00000493615 MMP1P03956 469 aa21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 ZYXQ15942 572 aaKnown RBP21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 HOMER1Q86YM7 354 aa21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 SCYL3Q8IZE3 742 aa21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 GPKOWQ92917 476 aaPredicted RBP eCLIP21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 PIGSQ96S52 555 aa21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 GINM1Q9NU53 330 aa21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 ISY1Q9ULR0 285 aaKnown RBP21.78■■□□□ 1.08
NECTIN3-211ENST00000493615 ADGRF4Q8IZF3 695 aa21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 JMJD4Q9H9V9 463 aa21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 RBM27Q9P2N5 1060 aaKnown RBP21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 TYW1BQ6NUM6 668 aa21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 RRP36Q96EU6 259 aaKnown RBP21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 PHF20Q9BVI0 1012 aa21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 VCPKMTQ9H867 229 aa21.77■■□□□ 1.08
NECTIN3-211ENST00000493615 MYH6P13533 1939 aa21.76■■□□□ 1.07
NECTIN3-211ENST00000493615 BTBD18B2RXH4 712 aa21.76■■□□□ 1.07
NECTIN3-211ENST00000493615 BMP3P12645 472 aa21.76■■□□□ 1.07
NECTIN3-211ENST00000493615 WWC2Q6AWC2 1192 aa21.76■■□□□ 1.07
NECTIN3-211ENST00000493615 OXER1Q8TDS5 423 aa21.76■■□□□ 1.07
NECTIN3-211ENST00000493615 GOPCQ9HD26 462 aa21.76■■□□□ 1.07
NECTIN3-211ENST00000493615 TFIP11Q9UBB9 837 aaKnown RBP21.76■■□□□ 1.07
NECTIN3-211ENST00000493615 ATAD5Q96QE3 1844 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 USP17L10C9JJH3 530 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 PTPRAP18433 802 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 NCLP19338 710 aaKnown RBP21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 NPY5RQ15761 445 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 DIS3L2Q8IYB7 885 aaKnown RBP21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 ADAMTS3O15072 1205 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 XBP1P17861 261 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 U2AF2P26368 475 aaKnown RBP eCLIP21.75■■□□□ 1.072e-6■■■■□ 26.1
NECTIN3-211ENST00000493615 FSTL1Q12841 308 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 DGKZQ13574 1117 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 HEATR3Q7Z4Q2 680 aa21.75■■□□□ 1.07
NECTIN3-211ENST00000493615 TMEM232C9JQI7 657 aa21.74■■□□□ 1.07
NECTIN3-211ENST00000493615 NR5A1Q13285 461 aa21.74■■□□□ 1.07
NECTIN3-211ENST00000493615 FAM83BQ5T0W9 1011 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms