RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 KLRC3Q07444 240 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 ALX1Q15699 326 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 CCL14Q16627 93 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 MFSD14CQ5VZR4 134 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 NECAB2Q7Z6G3 386 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 CHD1LQ86WJ1 897 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 STK11IPQ8N1F8 1099 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 NEDD1Q8NHV4 660 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 OSBPL3Q9H4L5 887 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 PDE4DIPQ5VU43 2346 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 VWA5AO00534 786 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 FOXP2O15409 715 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 TMEM132BQ14DG7 1078 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 OLFML2BQ68BL8 750 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
LRTM1-202ENST00000493075 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 NR2E3Q9Y5X4 410 aa13.67□□□□□ -0.22
LRTM1-202ENST00000493075 H0YGN5 161 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 PRDM1O75626 825 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 TTLL1O95922 423 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 TSPY3P0CV98 308 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 TSPY8P0CW00 308 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 ADORA2AP29274 412 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 COPB2P35606 906 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 STAT3P40763 770 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 PLS1Q14651 629 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 LHX8Q68G74 356 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 B4GALNT3Q6L9W6 998 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 CCDC129Q6ZRS4 1044 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 GMCL1P1Q8NEA9 526 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 NPLOC4Q8TAT6 608 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 CEP95Q96GE4 821 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 FBXO28Q9NVF7 368 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
LRTM1-202ENST00000493075 RAD21O60216 631 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 NDUFB10O96000 172 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 FGRP09769 529 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 FCER1AP12319 257 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 CCND3P30281 292 aaPredicted RBP13.65□□□□□ -0.22
LRTM1-202ENST00000493075 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
LRTM1-202ENST00000493075 TFAP4Q01664 338 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
LRTM1-202ENST00000493075 REPS2Q8NFH8 660 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 ZNF214Q9UL59 606 aaPredicted RBP13.65□□□□□ -0.22
LRTM1-202ENST00000493075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
LRTM1-202ENST00000493075 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
LRTM1-202ENST00000493075 PLIN4Q96Q06 1357 aa13.65□□□□□ -0.22
LRTM1-202ENST00000493075 MYH7P12883 1935 aa13.65□□□□□ -0.23
LRTM1-202ENST00000493075 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 ATP2A1O14983 1001 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 MSCO60682 206 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 COBLO75128 1261 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
LRTM1-202ENST00000493075 VPS53Q5VIR6 699 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 FEM1BQ9UK73 627 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
LRTM1-202ENST00000493075 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 PLXNB2O15031 1838 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 BAZ2AQ9UIF9 1905 aaKnown RBP13.64□□□□□ -0.23
LRTM1-202ENST00000493075 ORC4O43929 436 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 EVI5O60447 810 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 FGAP02671 866 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 FDX1P10109 184 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 NOVP48745 357 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 FAM47AQ5JRC9 791 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
LRTM1-202ENST00000493075 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
LRTM1-202ENST00000493075 NUP88Q99567 741 aaPredicted RBP13.64□□□□□ -0.23
LRTM1-202ENST00000493075 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 C11orf49Q9H6J7 331 aa13.64□□□□□ -0.23
LRTM1-202ENST00000493075 ZMYM6O95789 1325 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 A0A0D9SFI3 127 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 PLA2G6O60733 806 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 ZBED4O75132 1171 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
LRTM1-202ENST00000493075 COL6A1P12109 1028 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 SDSP20132 328 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 CYP2C19P33261 490 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 MFAP1P55081 439 aaKnown RBP13.63□□□□□ -0.23
LRTM1-202ENST00000493075 CTDSPL2Q05D32 466 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
LRTM1-202ENST00000493075 KCTD2Q14681 263 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 SLFN13Q68D06 897 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 RILPL2Q969X0 211 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms