RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ZFPM1Q8IX07 1006 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
PTPN7-216ENST00000492977 CCDC148Q8NFR7 591 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 TRIM44Q96DX7 344 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-216ENST00000492977 MTFR1LQ9H019 292 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 PCDHB6Q9Y5E3 794 aa16.11■□□□□ 0.17
PTPN7-216ENST00000492977 TRAPPC10P48553 1259 aa16.1■□□□□ 0.17
PTPN7-216ENST00000492977 SLC35G1Q2M3R5 365 aa16.1■□□□□ 0.17
PTPN7-216ENST00000492977 ASPRV1Q53RT3 343 aa16.1■□□□□ 0.17
PTPN7-216ENST00000492977 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
PTPN7-216ENST00000492977 PIBF1Q8WXW3 757 aa16.1■□□□□ 0.17
PTPN7-216ENST00000492977 GMLQ99445 158 aa16.1■□□□□ 0.17
PTPN7-216ENST00000492977 ZNF277Q9NRM2 450 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-216ENST00000492977 SRPRBQ9Y5M8 271 aaKnown RBP16.1■□□□□ 0.17
PTPN7-216ENST00000492977 GREB1LQ9C091 1923 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-216ENST00000492977 COL2A1P02458 1487 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 ZBTB7AO95365 584 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 SYKP43405 635 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 CACNB3P54284 484 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 TCP10Q12799 353 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 ANO6Q4KMQ2 910 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 USP17L2Q6R6M4 530 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 BLIDQ8IZY5 108 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 DAGLBQ8NCG7 672 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 BARHL2Q9NY43 387 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 HDAC9Q9UKV0 1011 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 ZNRF3Q9ULT6 936 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 PCDHA4Q9UN74 947 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 ATRNL1Q5VV63 1379 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 USP17L5A8MUK1 530 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 PSMD14O00487 310 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 PDHBP11177 359 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 STX1AQ16623 288 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 EARS2Q5JPH6 523 aaKnown RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 ZSCAN29Q8IWY8 852 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 NIM1KQ8IY84 436 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 CCDC12Q8WUD4 166 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 PRMT6Q96LA8 375 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 TRIM34Q9BYJ4 488 aa16.09■□□□□ 0.17
PTPN7-216ENST00000492977 TDRD3Q9H7E2 651 aaKnown RBP16.09■□□□□ 0.17
PTPN7-216ENST00000492977 SIPA1L1O43166 1804 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 STXBP3O00186 592 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 RAD17O75943 681 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 ATP2B1P20020 1258 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 HS1BP3Q53T59 392 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
PTPN7-216ENST00000492977 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 TATDN1Q6P1N9 297 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 ELOA2Q8IYF1 753 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-216ENST00000492977 OGFOD1Q8N543 542 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 GPKOWQ92917 476 aaPredicted RBP eCLIP16.08■□□□□ 0.16
PTPN7-216ENST00000492977 RIOX1Q9H6W3 641 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 DNAJC18Q9H819 358 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 KIAA1468Q9P260 1216 aa16.08■□□□□ 0.16
PTPN7-216ENST00000492977 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 MPHOSPH10O00566 681 aaKnown RBP16.07■□□□□ 0.16
PTPN7-216ENST00000492977 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-216ENST00000492977 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 HEATR3Q7Z4Q2 680 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-216ENST00000492977 AGBL3Q8NEM8 1001 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 FERMT2Q96AC1 680 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 ANO10Q9NW15 660 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 SEC63Q9UGP8 760 aaKnown RBP16.07■□□□□ 0.16
PTPN7-216ENST00000492977 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
PTPN7-216ENST00000492977 M0R2N6 131 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 ZNF165P49910 485 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 DLGAP5Q15398 846 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 PIK3AP1Q6ZUJ8 805 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
PTPN7-216ENST00000492977 MKL1Q969V6 931 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 NYAP2Q9P242 653 aa16.06■□□□□ 0.16
PTPN7-216ENST00000492977 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
PTPN7-216ENST00000492977 TYW1BQ6NUM6 668 aa16.05■□□□□ 0.16
PTPN7-216ENST00000492977 MTMR14Q8NCE2 650 aa16.05■□□□□ 0.16
PTPN7-216ENST00000492977 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
PTPN7-216ENST00000492977 COL4A5P29400 1685 aa16.05■□□□□ 0.16
PTPN7-216ENST00000492977 MYH4Q9Y623 1939 aa16.05■□□□□ 0.16
PTPN7-216ENST00000492977 RIOK3O14730 519 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 GNA11P29992 359 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms