RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 RBBP8NLQ8NC74 664 aaPredicted RBP4.07□□□□□ -1.76
SNX13-209ENST00000492626 GRIN3AQ8TCU5 1115 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 CHAC2Q8WUX2 184 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 NUDT8Q8WV74 236 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 MCM8Q9UJA3 840 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 ATP7BP35670 1465 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 ERBINQ96RT1 1412 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 KIF13BQ9NQT8 1826 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 GPR25O00155 361 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 BMP6P22004 513 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 ZNF423Q2M1K9 1284 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 PERM1Q5SV97 790 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 HGSNATQ68CP4 663 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 WNT8BQ93098 351 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 ADAM19Q9H013 955 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 JPH1Q9HDC5 661 aaPredicted RBP4.07□□□□□ -1.76
SNX13-209ENST00000492626 SSU72Q9NP77 194 aaKnown RBP4.07□□□□□ -1.76
SNX13-209ENST00000492626 OSGEPQ9NPF4 335 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 REV1Q9UBZ9 1251 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 CCDC141Q6ZP82 1450 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 MBD5Q9P267 1494 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 PRAMEF27A3QJZ7 478 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 ATF3P18847 181 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 VWA5B2Q8N398 1253 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 EHMT1Q9H9B1 1298 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 FAM86C2PA6NEL3 165 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 TOMM70O94826 608 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 SLC7A5Q01650 507 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 SV2CQ496J9 727 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 CCAR1Q8IX12 1150 aaKnown RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 ZNF669Q96BR6 464 aaPredicted RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 GMIPQ9P107 970 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 GDF2Q9UK05 429 aaPredicted RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 SUGT1Q9Y2Z0 365 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 PTCH2Q9Y6C5 1203 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 CEP162Q5TB80 1403 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 NRG2O14511 850 aaPredicted RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 LILRB5O75023 590 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 TMEM67Q5HYA8 995 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 KIAA1211LQ6NV74 962 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 GPBAR1Q8TDU6 330 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 NDFIP2Q9NV92 336 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 TACC3Q9Y6A5 838 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 ELOA3CA0A087WX78 387 aaPredicted RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 ELOA3DA6NLF2 546 aaPredicted RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 NEURL1BA8MQ27 555 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 NOP56O00567 594 aaKnown RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 ARAFP10398 606 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 ELOA3BQ3SY89 546 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 NLRC3Q7RTR2 1065 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 FAM13CQ8NE31 585 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 ELOA3Q8NG57 546 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 SOX17Q9H6I2 414 aaPredicted RBP4.06□□□□□ -1.76
SNX13-209ENST00000492626 TMEM260Q9NX78 707 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 MSRB2Q9Y3D2 182 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 SBNO1A3KN83 1393 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 NHSQ6T4R5 1651 aa4.06□□□□□ -1.76
SNX13-209ENST00000492626 ATE1O95260 518 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 CAPN2P17655 700 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 CTCFP49711 727 aaPredicted RBP4.05□□□□□ -1.76
SNX13-209ENST00000492626 LILRB2Q8N423 598 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 GOLGA6L1Q8N7Z2 621 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 ATL2Q8NHH9 583 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 GBP3Q9H0R5 595 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 PIDD1Q9HB75 910 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 HOMER2Q9NSB8 354 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 DACH1Q9UI36 760 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 SSH2Q76I76 1423 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 PTPRUQ92729 1446 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 A0A1W2PQH9 124 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 PLSCR1O15162 318 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 AMPD1P23109 780 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 MAOBP27338 520 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 GBP1P32455 592 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 VN1R5Q7Z5H4 357 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 CRACR2BQ8N4Y2 399 aaPredicted RBP4.05□□□□□ -1.76
SNX13-209ENST00000492626 KLHL23Q8NBE8 558 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 KCT2Q8NC54 265 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 GAL3ST3Q96A11 431 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 MFSD3Q96ES6 412 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 PLPPR2Q96GM1 343 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 GPATCH3Q96I76 525 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 CCDC144AA2RUR9 1427 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 ARFGEF1Q9Y6D6 1849 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 ZBTB42B2RXF5 422 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 MYCLP1P12525 358 aaPredicted RBP4.05□□□□□ -1.76
SNX13-209ENST00000492626 HCLS1P14317 486 aaPredicted RBP4.05□□□□□ -1.76
SNX13-209ENST00000492626 MAP4K3Q8IVH8 894 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 TNFRSF25Q93038 417 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 APBA2Q99767 749 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 SPATA9Q9BWV2 254 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 MTFR1LQ9H019 292 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 LEMD3Q9Y2U8 911 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 SYNGAP1Q96PV0 1343 aa4.05□□□□□ -1.76
SNX13-209ENST00000492626 HEATR6Q6AI08 1181 aaKnown RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 RUFY4Q6ZNE9 571 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 BRINP3Q76B58 766 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 ADAT2Q7Z6V5 191 aaKnown RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 KIAA0907Q7Z7F0 614 aaPredicted RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 CRIPAKQ8N1N5 446 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms