RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PLCD3Q8N3E9 789 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 ENAHQ8N8S7 591 aaPredicted RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 PDCL3Q9H2J4 239 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 RPAP3Q9H6T3 665 aaPredicted RBP5.11□□□□□ -1.59
TRA2B-215ENST00000492417 FBXO28Q9NVF7 368 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 CFAP45Q9UL16 551 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 RASA1P20936 1047 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 UBA7P41226 1012 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 MATR3P43243 847 aaKnown RBP eCLIP5.11□□□□□ -1.595e-10■■□□□ 12.8
TRA2B-215ENST00000492417 PPP4CP60510 307 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 TMEM266Q2M3C6 531 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 KRT40Q6A162 431 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 RNF214Q8ND24 703 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 ZNF280CQ8ND82 737 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 STAG1Q8WVM7 1258 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 PSTPIP2Q9H939 334 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 SENP2Q9HC62 589 aa5.11□□□□□ -1.59
TRA2B-215ENST00000492417 C4BP0C0L5 1744 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 RGPD1P0DJD0 1748 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CD2BP2O95400 341 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 LARGE1O95461 756 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 ADCY7P51828 1080 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CCDC173Q0VFZ6 552 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 SCRN1Q12765 414 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 ARHGEF16Q5VV41 709 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 ISM2Q6H9L7 571 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 GIMAP6Q6P9H5 292 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 USP50Q70EL3 339 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 STAG2Q8N3U4 1231 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 BMP2KQ9NSY1 1161 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 ARGLU1Q9NWB6 273 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 MYH14Q7Z406 1995 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 SH2B2O14492 632 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 SYT1P21579 422 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 TXKP42681 527 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CCNA1P78396 465 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 DNM1Q05193 864 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CDC37Q16543 378 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 SPECC1Q5M775 1068 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 GPATCH4Q5T3I0 446 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 SYDE2Q5VT97 1194 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 SNRNP48Q6IEG0 339 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CHADLQ6NUI6 762 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 NEDD1Q8NHV4 660 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CLMNQ96JQ2 1002 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 AMNQ9BXJ7 453 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CWC15Q9P013 229 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 RBM27Q9P2N5 1060 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 FAM198AQ9UFP1 575 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 TSKSQ9UJT2 592 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 ZHX1Q9UKY1 873 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 UQCRHLA0A096LP55 91 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 KLRG2A4D1S0 409 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 B4DLN1 442 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CCNT1O60563 726 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 TRPA1O75762 1119 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 NDUFB10O96000 172 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 UQCRHP07919 91 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 EIF2AK2P19525 551 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 HTRA3P83110 453 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 UBE2SQ16763 222 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 FAM47CQ5HY64 1035 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 SEPT14Q6ZU15 432 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 REXO1Q8N1G1 1221 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 OPTNQ96CV9 577 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 TM6SF1Q9BZW5 370 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 VPS33BQ9H267 617 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 TCP11L1Q9NUJ3 509 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 HOOK1Q9UJC3 728 aaKnown RBP5.1□□□□□ -1.59
TRA2B-215ENST00000492417 CEP131Q9UPN4 1083 aa5.1□□□□□ -1.59
TRA2B-215ENST00000492417 BTBD18B2RXH4 712 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 POTEB2H3BUK9 544 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 NOP56O00567 594 aaKnown RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 CAP2P40123 477 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 SNAPC2Q13487 334 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 DGKZQ13574 1117 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 INF2Q27J81 1249 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 SHROOM1Q2M3G4 852 aaPredicted RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 SASS6Q6UVJ0 657 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 MAEAQ7L5Y9 396 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 RASGRP2Q7LDG7 609 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 DGKHQ86XP1 1220 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 CHAMP1Q96JM3 812 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 PCMTD1Q96MG8 357 aaPredicted RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 RAB34Q9BZG1 259 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 GRPEL1Q9HAV7 217 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 MTMR4Q9NYA4 1195 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 MRPL11Q9Y3B7 192 aaKnown RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 GCOM1H8Y6P7 765 aaPredicted RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 POLR2MP0CAP2 368 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 PCP11498 1178 aaKnown RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 SCG2P13521 617 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 RHBDL3P58872 404 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 ANKRD13CQ8N6S4 541 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 SMC1BQ8NDV3 1235 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 C7orf43Q8WVR3 580 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 GTF3C6Q969F1 213 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 SLF1Q9BQI6 1058 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 PNMA3Q9UL41 463 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 NOD1Q9Y239 953 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms