RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 SMIM22K7EJ46 135 aa15.09■□□□□ 0.01
TREX1-204ENST00000492235 PRKAB2O43741 272 aa15.09■□□□□ 0.01
TREX1-204ENST00000492235 RARBP10826 455 aa15.09■□□□□ 0.01
TREX1-204ENST00000492235 C1orf53Q5VUE5 145 aa15.09■□□□□ 0.01
TREX1-204ENST00000492235 MMP19Q99542 508 aa15.09■□□□□ 0.01
TREX1-204ENST00000492235 SH2D4AQ9H788 454 aa15.09■□□□□ 0.01
TREX1-204ENST00000492235 CYP2D7A0A087X1C5 515 aa15.08■□□□□ 0
TREX1-204ENST00000492235 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
TREX1-204ENST00000492235 SLC25A27O95847 323 aa15.08■□□□□ 0
TREX1-204ENST00000492235 PGK1P00558 417 aa15.08■□□□□ 0
TREX1-204ENST00000492235 PGK2P07205 417 aa15.08■□□□□ 0
TREX1-204ENST00000492235 ITGB8P26012 769 aa15.08■□□□□ 0
TREX1-204ENST00000492235 SLFNL1Q499Z3 407 aa15.08■□□□□ 0
TREX1-204ENST00000492235 HSP90AB4PQ58FF6 505 aa15.08■□□□□ 0
TREX1-204ENST00000492235 PRDM6Q9NQX0 595 aa15.08■□□□□ 0
TREX1-204ENST00000492235 FBXO28Q9NVF7 368 aa15.08■□□□□ 0
TREX1-204ENST00000492235 PHF24Q9UPV7 400 aa15.08■□□□□ 0
TREX1-204ENST00000492235 TACC3Q9Y6A5 838 aa15.08■□□□□ 0
TREX1-204ENST00000492235 VCANP13611 3396 aa15.07■□□□□ 0
TREX1-204ENST00000492235 PQBP1O60828 265 aaKnown RBP15.07■□□□□ 0
TREX1-204ENST00000492235 MBD4O95243 580 aa15.07■□□□□ 0
TREX1-204ENST00000492235 CLTBP09497 229 aa15.07■□□□□ 0
TREX1-204ENST00000492235 FOSL2P15408 326 aa15.07■□□□□ 0
TREX1-204ENST00000492235 TAL1P17542 331 aaPredicted RBP15.07■□□□□ 0
TREX1-204ENST00000492235 EPHB4P54760 987 aa15.07■□□□□ 0
TREX1-204ENST00000492235 RNF180Q86T96 592 aa15.07■□□□□ 0
TREX1-204ENST00000492235 CLASRPQ8N2M8 674 aaKnown RBP15.07■□□□□ 0
TREX1-204ENST00000492235 PANK1Q8TE04 598 aa15.07■□□□□ 0
TREX1-204ENST00000492235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
TREX1-204ENST00000492235 LENG1Q96BZ8 264 aaPredicted RBP15.07■□□□□ 0
TREX1-204ENST00000492235 RNPC3Q96LT9 517 aaKnown RBP15.07■□□□□ 0
TREX1-204ENST00000492235 TINF2Q9BSI4 451 aa15.07■□□□□ 0
TREX1-204ENST00000492235 NRBP1Q9UHY1 535 aa15.07■□□□□ 0
TREX1-204ENST00000492235 CDH23Q9H251 3354 aa15.07■□□□□ 0
TREX1-204ENST00000492235 A0A1W2PQ45 241 aaPredicted RBP15.06■□□□□ 0
TREX1-204ENST00000492235 A0A1W2PQY0 241 aa15.06■□□□□ 0
TREX1-204ENST00000492235 RAD21O60216 631 aa15.06■□□□□ 0
TREX1-204ENST00000492235 IFIT2P09913 472 aaKnown RBP15.06■□□□□ 0
TREX1-204ENST00000492235 EEF2P13639 858 aaKnown RBP15.06■□□□□ 0
TREX1-204ENST00000492235 RAG1P15918 1043 aa15.06■□□□□ 0
TREX1-204ENST00000492235 CDK8P49336 464 aa15.06■□□□□ 0
TREX1-204ENST00000492235 KCTD2Q14681 263 aa15.06■□□□□ 0
TREX1-204ENST00000492235 RIOX2Q8IUF8 465 aa15.06■□□□□ 0
TREX1-204ENST00000492235 CCDC17Q96LX7 622 aa15.06■□□□□ 0
TREX1-204ENST00000492235 ATP8A2Q9NTI2 1148 aa15.06■□□□□ 0
TREX1-204ENST00000492235 ADAMTS5Q9UNA0 930 aa15.06■□□□□ 0
TREX1-204ENST00000492235 USP17L12C9JPN9 530 aa15.05■□□□□ -0
TREX1-204ENST00000492235 USP17L21D6R901 530 aa15.05■□□□□ -0
TREX1-204ENST00000492235 CHGBP05060 677 aa15.05■□□□□ -0
TREX1-204ENST00000492235 ADD2P35612 726 aa15.05■□□□□ -0
TREX1-204ENST00000492235 STAT3P40763 770 aa15.05■□□□□ -0
TREX1-204ENST00000492235 ZNF792Q3KQV3 632 aa15.05■□□□□ -0
TREX1-204ENST00000492235 C12orf60Q5U649 245 aa15.05■□□□□ -0
TREX1-204ENST00000492235 AMOTL1Q8IY63 956 aa15.05■□□□□ -0
TREX1-204ENST00000492235 KIF1BPQ96EK5 621 aa15.05■□□□□ -0
TREX1-204ENST00000492235 BOLA2Q9H3K6 86 aa15.05■□□□□ -0
TREX1-204ENST00000492235 TMEM39AQ9NV64 488 aa15.05■□□□□ -0
TREX1-204ENST00000492235 PAG1Q9NWQ8 432 aa15.05■□□□□ -0
TREX1-204ENST00000492235 PRUNE2Q8WUY3 3088 aa15.04■□□□□ -0
TREX1-204ENST00000492235 VWA5AO00534 786 aa15.04■□□□□ -0
TREX1-204ENST00000492235 KIAA0355O15063 1070 aa15.04■□□□□ -0
TREX1-204ENST00000492235 ZNF865P0CJ78 1059 aaPredicted RBP15.04■□□□□ -0
TREX1-204ENST00000492235 AKR1A1P14550 325 aa15.04■□□□□ -0
TREX1-204ENST00000492235 FPGSQ05932 587 aa15.04■□□□□ -0
TREX1-204ENST00000492235 FAM83BQ5T0W9 1011 aa15.04■□□□□ -0
TREX1-204ENST00000492235 C16orf86Q6ZW13 317 aa15.04■□□□□ -0
TREX1-204ENST00000492235 GOPCQ9HD26 462 aa15.04■□□□□ -0
TREX1-204ENST00000492235 ZNF214Q9UL59 606 aaPredicted RBP15.04■□□□□ -0
TREX1-204ENST00000492235 PPP1R9AQ9ULJ8 1098 aa15.04■□□□□ -0
TREX1-204ENST00000492235 DIS3Q9Y2L1 958 aaKnown RBP15.04■□□□□ -0
TREX1-204ENST00000492235 SPTBN5Q9NRC6 3674 aaKnown RBP15.03■□□□□ -0
TREX1-204ENST00000492235 ROBO3Q96MS0 1386 aa15.03■□□□□ -0
TREX1-204ENST00000492235 ADAMTS4O75173 837 aa15.03■□□□□ -0
TREX1-204ENST00000492235 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
TREX1-204ENST00000492235 REPS2Q8NFH8 660 aa15.03■□□□□ -0
TREX1-204ENST00000492235 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.03■□□□□ -0
TREX1-204ENST00000492235 KANSL2Q9H9L4 492 aa15.03■□□□□ -0
TREX1-204ENST00000492235 STARD7Q9NQZ5 370 aa15.03■□□□□ -0
TREX1-204ENST00000492235 CNPY2Q9Y2B0 182 aa15.03■□□□□ -0
TREX1-204ENST00000492235 MYH7P12883 1935 aa15.03■□□□□ -0
TREX1-204ENST00000492235 SYNRGQ9UMZ2 1314 aa15.02■□□□□ -0
TREX1-204ENST00000492235 TMEM265A0A087WTH1 108 aa15.02■□□□□ -0
TREX1-204ENST00000492235 ACLYP53396 1101 aa15.02■□□□□ -0
TREX1-204ENST00000492235 FAAP100Q0VG06 881 aa15.02■□□□□ -0
TREX1-204ENST00000492235 DDRGK1Q96HY6 314 aa15.02■□□□□ -0
TREX1-204ENST00000492235 NUP88Q99567 741 aaPredicted RBP15.02■□□□□ -0
TREX1-204ENST00000492235 SLC4A4Q9Y6R1 1079 aa15.02■□□□□ -0
TREX1-204ENST00000492235 DCDC2CA8MYV0 355 aa15.01□□□□□ -0.01
TREX1-204ENST00000492235 DNAJB2P25686 324 aa15.01□□□□□ -0.01
TREX1-204ENST00000492235 COPB2P35606 906 aa15.01□□□□□ -0.01
TREX1-204ENST00000492235 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
TREX1-204ENST00000492235 GRIN2CQ14957 1233 aa15.01□□□□□ -0.01
TREX1-204ENST00000492235 CTR9Q6PD62 1173 aa15.01□□□□□ -0.01
TREX1-204ENST00000492235 ANKRD33Q7Z3H0 272 aa15.01□□□□□ -0.01
TREX1-204ENST00000492235 TSEN34Q9BSV6 310 aaKnown RBP15.01□□□□□ -0.01
TREX1-204ENST00000492235 ZHX1Q9UKY1 873 aaPredicted RBP15.01□□□□□ -0.01
TREX1-204ENST00000492235 GREB1LQ9C091 1923 aaPredicted RBP15□□□□□ -0.01
TREX1-204ENST00000492235 HSFX4A0A1B0GTS1 333 aaPredicted RBP15□□□□□ -0.01
TREX1-204ENST00000492235 HSFX3A0A1B0GWH4 333 aaPredicted RBP15□□□□□ -0.01
TREX1-204ENST00000492235 MYADML2A6NDP7 307 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms