RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 C11orf49Q9H6J7 331 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 STAP2Q9UGK3 403 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 IVNS1ABPQ9Y6Y0 642 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 SZT2Q5T011 3432 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 MYH4Q9Y623 1939 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 M0R2C6 588 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 ATP2A1O14983 1001 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 ERC2O15083 957 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 FOXP2O15409 715 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 MSCO60682 206 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 SLC25A27O95847 323 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 RIOX2Q8IUF8 465 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 IFNL3Q8IZI9 196 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 ATG4CQ96DT6 458 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 BCL11AQ9H165 835 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 GOPCQ9HD26 462 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 PLXNA1Q9UIW2 1896 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 ZNF214Q9UL59 606 aaPredicted RBP10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 PPP1R9AQ9ULJ8 1098 aa10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 DIS3Q9Y2L1 958 aaKnown RBP10.03□□□□□ -0.8
SMARCB1-207ENST00000491967 PLIN4Q96Q06 1357 aa10.02□□□□□ -0.8
SMARCB1-207ENST00000491967 F5H6K3 240 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 MX1P20591 662 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 CYP2C19P33261 490 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 KLRC3Q07444 240 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 AAMPQ13685 434 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 LRRFIP1Q32MZ4 808 aaKnown RBP10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 FBXO28Q9NVF7 368 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 MTMR4Q9NYA4 1195 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 NRBP1Q9UHY1 535 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 LAMA3Q16787 3333 aa10.02□□□□□ -0.81
SMARCB1-207ENST00000491967 FGRP09769 529 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 FCER1AP12319 257 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 STAT3P40763 770 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 NOVP48745 357 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 ZNF792Q3KQV3 632 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 FAM83BQ5T0W9 1011 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 WDR78Q5VTH9 848 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 DPP9Q86TI2 863 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 GMCL1P1Q8NEA9 526 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 NEDD1Q8NHV4 660 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 MAML3Q96JK9 1138 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 SEC62Q99442 399 aaKnown RBP10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 ZNF287Q9HBT7 754 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 SLC5A4Q9NY91 659 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 DNAH12Q6ZR08 3092 aa10.01□□□□□ -0.81
SMARCB1-207ENST00000491967 DNAJC25-GNG10A0A024R161 153 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 MINDY4BA8MYZ0 360 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 DNM1LO00429 736 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 SEPT4O43236 478 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 NDUFB10O96000 172 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 COPB2P35606 906 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 ALX1Q15699 326 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 LRRC26Q2I0M4 334 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 NCAPG2Q86XI2 1143 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 C7orf61Q8IZ16 206 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 PRPF38AQ8NAV1 312 aaKnown RBP10□□□□□ -0.81
SMARCB1-207ENST00000491967 CEP95Q96GE4 821 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 CRBNQ96SW2 442 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 SLF1Q9BQI6 1058 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 MKNK2Q9HBH9 465 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 CWC22Q9HCG8 908 aaKnown RBP10□□□□□ -0.81
SMARCB1-207ENST00000491967 ANAPC4Q9UJX5 808 aa10□□□□□ -0.81
SMARCB1-207ENST00000491967 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10□□□□□ -0.81
SMARCB1-207ENST00000491967 PLA2G6O60733 806 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 TTLL1O95922 423 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 PDE1AP54750 535 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 PPARAQ07869 468 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 SNX17Q15036 470 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 C1orf53Q5VUE5 145 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 MAMDC4Q6UXC1 1216 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 SMC5Q8IY18 1101 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 ZNF444Q8N0Y2 327 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 MSL3Q8N5Y2 521 aaKnown RBP9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 EVI5LQ96CN4 794 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 NUP88Q99567 741 aaPredicted RBP9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 TEX13BQ9BXU2 312 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 NACAP1Q9BZK3 213 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 SLC38A10Q9HBR0 1119 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 RIPK3Q9Y572 518 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 TACC3Q9Y6A5 838 aa9.99□□□□□ -0.81
SMARCB1-207ENST00000491967 SOX1O00570 391 aaPredicted RBP9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 PRDM1O75626 825 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 APPP05067 770 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 ZNF865P0CJ78 1059 aaPredicted RBP9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 MAGEA10P43363 369 aaPredicted RBP9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 TDO2P48775 406 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 OAZ1P54368 228 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 PDE4BQ07343 736 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 PLS1Q14651 629 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 LRIT3Q3SXY7 679 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 PRAMEF19Q5SWL8 479 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 ANKRD45Q5TZF3 282 aa9.98□□□□□ -0.81
SMARCB1-207ENST00000491967 ZNF467Q7Z7K2 595 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms