RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 CA12O43570 354 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 CRHR2Q13324 411 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 CCDC96Q2M329 555 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 SAMD1Q6SPF0 538 aaPredicted RBP27.22■■□□□ 1.95
SCN5A-213ENST00000491944 NFXL1Q6ZNB6 911 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 CATSPERGQ6ZRH7 1159 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 RASGRP2Q7LDG7 609 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 GMCL1Q96IK5 515 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 UPF3BQ9BZI7 483 aaKnown RBP27.22■■□□□ 1.95
SCN5A-213ENST00000491944 ZSWIM6Q9HCJ5 1215 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 SAGE1Q9NXZ1 904 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 TBC1D8O95759 1140 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 BMP3P12645 472 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 RUFY3Q7L099 469 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 SMCR8Q8TEV9 937 aaPredicted RBP27.22■■□□□ 1.95
SCN5A-213ENST00000491944 DCAF4Q8WV16 495 aa27.22■■□□□ 1.95
SCN5A-213ENST00000491944 FLOT1O75955 427 aa27.21■■□□□ 1.95
SCN5A-213ENST00000491944 TMTC2Q8N394 836 aa27.21■■□□□ 1.95
SCN5A-213ENST00000491944 CCDC69A6NI79 296 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 PDHBP11177 359 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 LIFRP42702 1097 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 Q6ZUG5 572 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 KCTD1Q719H9 257 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 CATIPQ7Z7H3 387 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 P2RX7Q99572 595 aaKnown RBP27.2■■□□□ 1.94
SCN5A-213ENST00000491944 TSKSQ9UJT2 592 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 PARP14Q460N5 1801 aa27.2■■□□□ 1.94
SCN5A-213ENST00000491944 PCNTO95613 3336 aa27.19■■□□□ 1.94
SCN5A-213ENST00000491944 FRMPD2Q68DX3 1309 aaPredicted RBP27.19■■□□□ 1.94
SCN5A-213ENST00000491944 IKQ13123 557 aaPredicted RBP27.19■■□□□ 1.94
SCN5A-213ENST00000491944 FBXO28Q9NVF7 368 aa27.19■■□□□ 1.94
SCN5A-213ENST00000491944 HSPA1AP0DMV8 641 aaKnown RBP27.18■■□□□ 1.94
SCN5A-213ENST00000491944 HSPA1BP0DMV9 641 aaKnown RBP27.18■■□□□ 1.94
SCN5A-213ENST00000491944 RBM25P49756 843 aaKnown RBP27.18■■□□□ 1.94
SCN5A-213ENST00000491944 HERVK_113P62684 666 aa27.18■■□□□ 1.94
SCN5A-213ENST00000491944 COG2Q14746 738 aa27.18■■□□□ 1.94
SCN5A-213ENST00000491944 ZNF654Q8IZM8 581 aa27.18■■□□□ 1.94
SCN5A-213ENST00000491944 IL17RAQ96F46 866 aa27.18■■□□□ 1.94
SCN5A-213ENST00000491944 R3HDMLQ9H3Y0 253 aa27.18■■□□□ 1.94
SCN5A-213ENST00000491944 RLFQ13129 1914 aa27.17■■□□□ 1.94
SCN5A-213ENST00000491944 TMEM232C9JQI7 657 aa27.17■■□□□ 1.94
SCN5A-213ENST00000491944 CFHR5Q9BXR6 569 aa27.17■■□□□ 1.94
SCN5A-213ENST00000491944 GPCPD1Q9NPB8 672 aa27.17■■□□□ 1.94
SCN5A-213ENST00000491944 FEM1BQ9UK73 627 aa27.17■■□□□ 1.94
SCN5A-213ENST00000491944 TLR2O60603 784 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 SNHG28P0DPA3 235 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 ZNF543Q08ER8 600 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 SGMS1Q86VZ5 419 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 NUP133Q8WUM0 1156 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 SLF1Q9BQI6 1058 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 MYL10Q9BUA6 226 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 PDRG1Q9NUG6 133 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 HOXC10Q9NYD6 342 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 CPA4Q9UI42 421 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 SLC12A7Q9Y666 1083 aa27.16■■□□□ 1.94
SCN5A-213ENST00000491944 ADGRA2Q96PE1 1338 aa27.15■■□□□ 1.94
SCN5A-213ENST00000491944 SPDYE16A6NNV3 312 aaPredicted RBP27.15■■□□□ 1.94
SCN5A-213ENST00000491944 PARP1P09874 1014 aaKnown RBP27.15■■□□□ 1.94
SCN5A-213ENST00000491944 STAT2P52630 851 aa27.15■■□□□ 1.94
SCN5A-213ENST00000491944 BRF1Q92994 677 aa27.15■■□□□ 1.94
SCN5A-213ENST00000491944 PPP1R9AQ9ULJ8 1098 aa27.15■■□□□ 1.94
SCN5A-213ENST00000491944 NAP1L2Q9ULW6 460 aaPredicted RBP27.15■■□□□ 1.94
SCN5A-213ENST00000491944 MYPNQ86TC9 1320 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 DDAH1O94760 285 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 GOLGA8HP0CJ92 632 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 DSG3P32926 999 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 GCLCP48506 637 aaPredicted RBP27.14■■□□□ 1.94
SCN5A-213ENST00000491944 ASPRV1Q53RT3 343 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 TTBK2Q6IQ55 1244 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 SYNE3Q6ZMZ3 975 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 FAM160B2Q86V87 743 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 CHURC1Q8WUH1 139 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 KIFC2Q96AC6 838 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 ATG4CQ96DT6 458 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 TBC1D32Q96NH3 1257 aa27.14■■□□□ 1.94
SCN5A-213ENST00000491944 FOXN1O15353 648 aa27.13■■□□□ 1.93
SCN5A-213ENST00000491944 TROAPQ12815 778 aa27.13■■□□□ 1.93
SCN5A-213ENST00000491944 GPATCH4Q5T3I0 446 aaKnown RBP27.13■■□□□ 1.93
SCN5A-213ENST00000491944 RAB11FIP4Q86YS3 637 aa27.13■■□□□ 1.93
SCN5A-213ENST00000491944 ANKRD13CQ8N6S4 541 aa27.13■■□□□ 1.93
SCN5A-213ENST00000491944 GTF3C2Q8WUA4 911 aaPredicted RBP27.13■■□□□ 1.93
SCN5A-213ENST00000491944 PAGR1Q9BTK6 254 aa27.13■■□□□ 1.93
SCN5A-213ENST00000491944 KLF18A0A0U1RQI7 1052 aa27.12■■□□□ 1.93
SCN5A-213ENST00000491944 APOBRQ0VD83 1088 aa27.12■■□□□ 1.93
SCN5A-213ENST00000491944 GRM4Q14833 912 aa27.12■■□□□ 1.93
SCN5A-213ENST00000491944 PRPF38AQ8NAV1 312 aaKnown RBP27.12■■□□□ 1.93
SCN5A-213ENST00000491944 BRPF3Q9ULD4 1205 aa27.12■■□□□ 1.93
SCN5A-213ENST00000491944 COL11A1P12107 1806 aaPredicted RBP27.12■■□□□ 1.93
SCN5A-213ENST00000491944 PLA2G6O60733 806 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 RXRAP19793 462 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 SLC16A2P36021 539 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 NEK4P51957 841 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 APOA5Q6Q788 366 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 C17orf99Q6UX52 265 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 MICU3Q86XE3 530 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 FBXL16Q8N461 479 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 KIF2CQ99661 725 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 AGXT2Q9BYV1 514 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 A0A0G2JMZ2 1700 aa27.11■■□□□ 1.93
SCN5A-213ENST00000491944 GPR25O00155 361 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms