RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SPATC1LQ9H0A9 340 aa10.7□□□□□ -0.7
HDAC3-211ENST00000491581 C11orf49Q9H6J7 331 aa10.7□□□□□ -0.7
HDAC3-211ENST00000491581 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
HDAC3-211ENST00000491581 DDX49Q9Y6V7 483 aaKnown RBP10.7□□□□□ -0.7
HDAC3-211ENST00000491581 SMCHD1A6NHR9 2005 aa10.69□□□□□ -0.7
HDAC3-211ENST00000491581 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-211ENST00000491581 XRCC5P13010 732 aaKnown RBP10.69□□□□□ -0.7
HDAC3-211ENST00000491581 ATN1P54259 1190 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-211ENST00000491581 GJC2Q5T442 439 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-211ENST00000491581 VPS53Q5VIR6 699 aa10.69□□□□□ -0.7
HDAC3-211ENST00000491581 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
HDAC3-211ENST00000491581 ARHGEF10LQ9HCE6 1279 aa10.69□□□□□ -0.7
HDAC3-211ENST00000491581 RIPK3Q9Y572 518 aa10.69□□□□□ -0.7
HDAC3-211ENST00000491581 LTBP2Q14767 1821 aa10.69□□□□□ -0.7
HDAC3-211ENST00000491581 MCM3APO60318 1980 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 SLC15A5A6NIM6 579 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 NMT2O60551 498 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 IGHA2P01877 340 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 APPP05067 770 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 COL6A1P12109 1028 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 PTGS1P23219 599 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 SNAP25P60880 206 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 IFNL3Q8IZI9 196 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 PIP4P2Q8N4L2 257 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 REPS2Q8NFH8 660 aa10.68□□□□□ -0.7
HDAC3-211ENST00000491581 RANBP2P49792 3224 aaKnown RBP10.67□□□□□ -0.7
HDAC3-211ENST00000491581 LCTP09848 1927 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 NDUFB10O96000 172 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 CYBAP13498 195 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 TDO2P48775 406 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 CCNA1P78396 465 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-211ENST00000491581 ANKRD45Q5TZF3 282 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 B4GALNT3Q6L9W6 998 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 DPP9Q86TI2 863 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 CEP95Q96GE4 821 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 SENP6Q9GZR1 1112 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-211ENST00000491581 ARPP21Q9UBL0 812 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-211ENST00000491581 CLIP2Q9UDT6 1046 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 IVNS1ABPQ9Y6Y0 642 aa10.67□□□□□ -0.7
HDAC3-211ENST00000491581 ROBO3Q96MS0 1386 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 IGKV6D-41A0A0C4DH26 115 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 F5H6K3 240 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 VWA5AO00534 786 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 WDR46O15213 610 aaKnown RBP10.66□□□□□ -0.7
HDAC3-211ENST00000491581 IGHDP01880 384 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 MX1P20591 662 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 MAGEA10P43363 369 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-211ENST00000491581 KLRC3Q07444 240 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 SBK1Q52WX2 424 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 ZMYM1Q5SVZ6 1142 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 ZSCAN25Q6NSZ9 544 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-211ENST00000491581 Q7L0L9 218 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 CPXCR1Q8N123 301 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 GTF3C2Q8WUA4 911 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-211ENST00000491581 FERMT2Q96AC1 680 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 MAML3Q96JK9 1138 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 CCDC17Q96LX7 622 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 CHMP4BQ9H444 224 aaKnown RBP10.66□□□□□ -0.7
HDAC3-211ENST00000491581 MKNK2Q9HBH9 465 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 HOXC10Q9NYD6 342 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 DDX20Q9UHI6 824 aaKnown RBP10.66□□□□□ -0.7
HDAC3-211ENST00000491581 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-211ENST00000491581 MTMR7Q9Y216 660 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 NR2E3Q9Y5X4 410 aa10.66□□□□□ -0.7
HDAC3-211ENST00000491581 DNAH12Q6ZR08 3092 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 TRIOBPQ9H2D6 2365 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 A0A0D9SFI3 127 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 HOXC6P09630 235 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 MFSD14CQ5VZR4 134 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 ANKLE1Q8NAG6 615 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 LPAR1Q92633 364 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 KIFC2Q96AC6 838 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 GDF15Q99988 308 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 KANSL2Q9H9L4 492 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 RAVER2Q9HCJ3 691 aaKnown RBP10.65□□□□□ -0.7
HDAC3-211ENST00000491581 PPP1R9AQ9ULJ8 1098 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 ADAMTS5Q9UNA0 930 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 CEP290O15078 2479 aa10.65□□□□□ -0.7
HDAC3-211ENST00000491581 LRRC37A2A6NM11 1700 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 TTC41PQ6P2S7 1318 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
HDAC3-211ENST00000491581 ADCY6O43306 1168 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 IRX6P78412 446 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-211ENST00000491581 PPARAQ07869 468 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 AMOTL1Q8IY63 956 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 EXOC6Q8TAG9 804 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 DDRGK1Q96HY6 314 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 GPATCH3Q96I76 525 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
HDAC3-211ENST00000491581 MMP19Q99542 508 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 IL17RBQ9NRM6 502 aa10.64□□□□□ -0.71
HDAC3-211ENST00000491581 MYADML2A6NDP7 307 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 GLRX3O76003 335 aaKnown RBP10.63□□□□□ -0.71
HDAC3-211ENST00000491581 PGK1P00558 417 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms