RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 LCTP09848 1927 aa16.8■□□□□ 0.28
NCK1-211ENST00000491539 KBTBD13C9JR72 458 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 FOSL2P15408 326 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 ERCC3P19447 782 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 USP14P54578 494 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 LRRC41Q15345 812 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 OLFML2BQ68BL8 750 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 SLC44A5Q8NCS7 719 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.28
NCK1-211ENST00000491539 SPATC1LQ9H0A9 340 aa16.79■□□□□ 0.28
NCK1-211ENST00000491539 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 CHD7Q9P2D1 2997 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 SEPT4O43236 478 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 CHGBP05060 677 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 CYP2D6P10635 497 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
NCK1-211ENST00000491539 GABPAQ06546 454 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 UBE3CQ15386 1083 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 ARMT1Q9H993 441 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
NCK1-211ENST00000491539 PRDM6Q9NQX0 595 aa16.78■□□□□ 0.28
NCK1-211ENST00000491539 DPP9Q86TI2 863 aa16.77■□□□□ 0.28
NCK1-211ENST00000491539 ATG4CQ96DT6 458 aa16.77■□□□□ 0.28
NCK1-211ENST00000491539 MCM9Q9NXL9 1143 aa16.77■□□□□ 0.28
NCK1-211ENST00000491539 XIRP2A4UGR9 3374 aa16.76■□□□□ 0.27
NCK1-211ENST00000491539 MBD4O95243 580 aa16.76■□□□□ 0.27
NCK1-211ENST00000491539 POLR3DP05423 398 aaPredicted RBP16.76■□□□□ 0.27
NCK1-211ENST00000491539 TLE2Q04725 743 aa16.76■□□□□ 0.27
NCK1-211ENST00000491539 MAML3Q96JK9 1138 aa16.76■□□□□ 0.27
NCK1-211ENST00000491539 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
NCK1-211ENST00000491539 RAPGEFL1Q9UHV5 662 aa16.76■□□□□ 0.27
NCK1-211ENST00000491539 PRKAB2O43741 272 aa16.75■□□□□ 0.27
NCK1-211ENST00000491539 TAL1P17542 331 aaPredicted RBP16.75■□□□□ 0.27
NCK1-211ENST00000491539 ARRDC4Q8NCT1 418 aa16.75■□□□□ 0.27
NCK1-211ENST00000491539 SHCBP1Q8NEM2 672 aa16.75■□□□□ 0.27
NCK1-211ENST00000491539 GPATCH3Q96I76 525 aa16.75■□□□□ 0.27
NCK1-211ENST00000491539 RNPC3Q96LT9 517 aaKnown RBP16.75■□□□□ 0.27
NCK1-211ENST00000491539 CRBNQ96SW2 442 aa16.75■□□□□ 0.27
NCK1-211ENST00000491539 PHF24Q9UPV7 400 aa16.75■□□□□ 0.27
NCK1-211ENST00000491539 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
NCK1-211ENST00000491539 MYO9BQ13459 2157 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
NCK1-211ENST00000491539 PGK1P00558 417 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 TSHZ3Q63HK5 1081 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 NCAPG2Q86XI2 1143 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 SPICE1Q8N0Z3 855 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 KBTBD3Q8NAB2 608 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 PUS7LQ9H0K6 701 aaKnown RBP16.74■□□□□ 0.27
NCK1-211ENST00000491539 ATP8A2Q9NTI2 1148 aa16.74■□□□□ 0.27
NCK1-211ENST00000491539 COL4A4P53420 1690 aaPredicted RBP16.74■□□□□ 0.27
NCK1-211ENST00000491539 A0A1W2PQ45 241 aaPredicted RBP16.73■□□□□ 0.27
NCK1-211ENST00000491539 A0A1W2PQY0 241 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 PQBP1O60828 265 aaKnown RBP16.73■□□□□ 0.27
NCK1-211ENST00000491539 PGK2P07205 417 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 CLTBP09497 229 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 PLS1Q14651 629 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 COG2Q14746 738 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 C1orf53Q5VUE5 145 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
NCK1-211ENST00000491539 SIAH1Q8IUQ4 282 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 DYNLL2Q96FJ2 89 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 CABP5Q9NP86 173 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 XPNPEP3Q9NQH7 507 aa16.73■□□□□ 0.27
NCK1-211ENST00000491539 TTC41PQ6P2S7 1318 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 PTPRSQ13332 1948 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 FLOT1O75955 427 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 AKR1B1P15121 316 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 DNAJB2P25686 324 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 DSG3P32926 999 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
NCK1-211ENST00000491539 TMEM132BQ14DG7 1078 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 OTUD7AQ8TE49 926 aaPredicted RBP16.72■□□□□ 0.27
NCK1-211ENST00000491539 FBXO28Q9NVF7 368 aa16.72■□□□□ 0.27
NCK1-211ENST00000491539 TANC1Q9C0D5 1861 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 SCN5AQ14524 2016 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 MYADML2A6NDP7 307 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 SWAP70Q9UH65 585 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 BDP1A6H8Y1 2624 aa16.71■□□□□ 0.27
NCK1-211ENST00000491539 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
NCK1-211ENST00000491539 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
NCK1-211ENST00000491539 CYP2D7A0A087X1C5 515 aa16.7■□□□□ 0.26
NCK1-211ENST00000491539 STRNO43815 780 aa16.7■□□□□ 0.26
NCK1-211ENST00000491539 HDAC1Q13547 482 aaPredicted RBP16.7■□□□□ 0.26
NCK1-211ENST00000491539 APPBP2Q92624 585 aa16.7■□□□□ 0.26
NCK1-211ENST00000491539 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
NCK1-211ENST00000491539 SLC4A4Q9Y6R1 1079 aa16.7■□□□□ 0.26
NCK1-211ENST00000491539 TMEM265A0A087WTH1 108 aa16.69■□□□□ 0.26
NCK1-211ENST00000491539 GRXCR1A8MXD5 290 aa16.69■□□□□ 0.26
NCK1-211ENST00000491539 USP17L12C9JPN9 530 aa16.69■□□□□ 0.26
NCK1-211ENST00000491539 USP17L21D6R901 530 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms