RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 FUCA2Q9BTY2 467 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 TOMM22Q9NS69 142 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 GGA1Q9UJY5 639 aa13.81□□□□□ -0.2
SRGAP3-210ENST00000491467 A0A1W2PQ27 194 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 A0A1W2PQ64 194 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 ECE2O60344 883 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 PLCG2P16885 1265 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 PDE4BQ07343 736 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 SEC23AQ15436 765 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 RTN1Q16799 776 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 RRP12Q5JTH9 1297 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 ADALQ6DHV7 355 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 BICD2Q8TD16 824 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 ALG1Q9BT22 464 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 TNMDQ9H2S6 317 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 FZD1Q9UP38 647 aa13.8□□□□□ -0.2
SRGAP3-210ENST00000491467 DEXIO95424 95 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 TFRCP02786 760 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 CDC27P30260 824 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 PRMT2P55345 433 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 TAF1CQ15572 869 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 MYSM1Q5VVJ2 828 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 CCDC73Q6ZRK6 1079 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 PTPN18Q99952 460 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 ZFYVE28Q9HCC9 887 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 MYOZ2Q9NPC6 264 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 DCP1AQ9NPI6 582 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 SUGT1Q9Y2Z0 365 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 TACC3Q9Y6A5 838 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 MYH8P13535 1937 aa13.79□□□□□ -0.2
SRGAP3-210ENST00000491467 PIEZO1Q92508 2521 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 USP17L12C9JPN9 530 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 USP17L21D6R901 530 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 DTNBO60941 627 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 SGPL1O95470 568 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 VIL1P09327 827 aaKnown RBP13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 FOSL2P15408 326 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 XBP1P17861 261 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 LIG1P18858 919 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 KLRK1P26718 216 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 GRK4P32298 578 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 ZNF280AP59817 542 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 UBXN2AP68543 259 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 GPSM2P81274 684 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 KRT40Q6A162 431 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 TXNRD3Q86VQ6 643 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 MICU3Q86XE3 530 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 LINC00301Q8NCQ3 95 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 MAP3K14Q99558 947 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 RNF26Q9BY78 433 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 CD209Q9NNX6 404 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 DACT1Q9NYF0 836 aa13.78□□□□□ -0.2
SRGAP3-210ENST00000491467 PPP6R2O75170 966 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 DDAH1O94760 285 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 UFL1O94874 794 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 TNKSO95271 1327 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 GNRH1P01148 92 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 PRDX5P30044 214 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 STK38Q15208 465 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 CCAR1Q8IX12 1150 aaKnown RBP13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 CRACR2BQ8N4Y2 399 aaPredicted RBP13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 RAET1EQ8TD07 263 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 PAWRQ96IZ0 340 aaKnown RBP13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 CLMNQ96JQ2 1002 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 INCENPQ9NQS7 918 aa13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRGAP3-210ENST00000491467 ROBO3Q96MS0 1386 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 C6orf229H3BNL8 230 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 SPTLC2O15270 562 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 PRPF3O43395 683 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 AKAP17AQ02040 695 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 GUCY1B3Q02153 619 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 GNL2Q13823 731 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 SLC39A14Q15043 492 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 SF3A1Q15459 793 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms