RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 PRDM5Q9NQX1 630 aaPredicted RBP10.29□□□□□ -0.76
HPS4-215ENST00000491142 SNRKQ9NRH2 765 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 GINM1Q9NU53 330 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 BTBD7Q9P203 1132 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 FLT1P17948 1338 aa10.29□□□□□ -0.76
HPS4-215ENST00000491142 FRMPD3Q5JV73 1810 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L15C9J2P7 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 MSCO60682 206 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
HPS4-215ENST00000491142 GH2P01242 217 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 IGHA2P01877 340 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 HOXC6P09630 235 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 CYBAP13498 195 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 CCNA1P78396 465 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 SMAD3P84022 425 aaKnown RBP10.28□□□□□ -0.76
HPS4-215ENST00000491142 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 GRB14Q14449 540 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 CATSPERGQ6ZRH7 1159 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 SH3RF1Q7Z6J0 888 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 ERC1Q8IUD2 1116 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 IL27Q8NEV9 243 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 IL17RAQ96F46 866 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 SLKQ9H2G2 1235 aaPredicted RBP10.28□□□□□ -0.76
HPS4-215ENST00000491142 TTC41PQ6P2S7 1318 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
HPS4-215ENST00000491142 TRIM43BA6NCK2 446 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 K7ELQ4 463 aaPredicted RBP10.27□□□□□ -0.77
HPS4-215ENST00000491142 FOSL2P15408 326 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 DYNLL1P63167 89 aaKnown RBP10.27□□□□□ -0.77
HPS4-215ENST00000491142 TRIM60Q495X7 471 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 ARRDC4Q8NCT1 418 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 PI4K2BQ8TCG2 481 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 ACER1Q8TDN7 264 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 TRIM43Q96BQ3 446 aaPredicted RBP10.27□□□□□ -0.77
HPS4-215ENST00000491142 C12orf42Q96LP6 360 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 FEZ1Q99689 392 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 PDLIM7Q9NR12 457 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 IVNS1ABPQ9Y6Y0 642 aa10.27□□□□□ -0.77
HPS4-215ENST00000491142 KBTBD13C9JR72 458 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 CYP2E1P05181 493 aaPredicted RBP10.26□□□□□ -0.77
HPS4-215ENST00000491142 UQCRFS1P1P0C7P4 283 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 VCAM1P19320 739 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 ITGB8P26012 769 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 CHMLP26374 656 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 ADCYAP1R1P41586 468 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 SNX17Q15036 470 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 RAB3GAP1Q15042 981 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 TATDN1Q6P1N9 297 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 LBX2Q6XYB7 198 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 USP38Q8NB14 1042 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
HPS4-215ENST00000491142 FERMT2Q96AC1 680 aa10.26□□□□□ -0.77
HPS4-215ENST00000491142 TTC28Q96AY4 2481 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
HPS4-215ENST00000491142 HLA-DOAP06340 250 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 COL9A1P20849 921 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 ADORA2AP29274 412 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 EPHB4P54760 987 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 ANAPC15P60006 121 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 DPP9Q86TI2 863 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 PDCD7Q8N8D1 485 aaKnown RBP10.25□□□□□ -0.77
HPS4-215ENST00000491142 RNF25Q96BH1 459 aaPredicted RBP10.25□□□□□ -0.77
HPS4-215ENST00000491142 KIAA1683Q9H0B3 1180 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 RPAP3Q9H6T3 665 aaPredicted RBP10.25□□□□□ -0.77
HPS4-215ENST00000491142 IL1RAPL2Q9NP60 686 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 RAPGEFL1Q9UHV5 662 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 RLFQ13129 1914 aa10.25□□□□□ -0.77
HPS4-215ENST00000491142 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 SEPT4O43236 478 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 COBLO75128 1261 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 USP14P54578 494 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 TLE2Q04725 743 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 G3BP1Q13283 466 aaKnown RBP eCLIP10.24□□□□□ -0.77
HPS4-215ENST00000491142 GRIN2CQ14957 1233 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 LRRC41Q15345 812 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 TTC39AQ5SRH9 613 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 OLFML2BQ68BL8 750 aa10.24□□□□□ -0.77
HPS4-215ENST00000491142 CLASRPQ8N2M8 674 aaKnown RBP10.24□□□□□ -0.77
HPS4-215ENST00000491142 MOV10L1Q9BXT6 1211 aaKnown RBP10.24□□□□□ -0.77
HPS4-215ENST00000491142 PIH1D3Q9NQM4 214 aaKnown RBP10.24□□□□□ -0.77
HPS4-215ENST00000491142 CDK5RAP2Q96SN8 1893 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 TNFRSF10AO00220 468 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 CD2BP2O95400 341 aaKnown RBP10.23□□□□□ -0.77
HPS4-215ENST00000491142 CYP7A1P22680 504 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 MCCP23508 829 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 ZAP70P43403 619 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 OS9Q13438 667 aaPredicted RBP10.23□□□□□ -0.77
HPS4-215ENST00000491142 ABCB5Q2M3G0 1257 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 CERKLQ49MI3 558 aaPredicted RBP10.23□□□□□ -0.77
HPS4-215ENST00000491142 FAM47AQ5JRC9 791 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms