RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 GRM4Q14833 912 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 ANKRD1Q15327 319 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 NFXL1Q6ZNB6 911 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 GADL1Q6ZQY3 521 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 PAXIP1Q6ZW49 1069 aaPredicted RBP21.32■■□□□ 1
PRDM2-209ENST00000491134 CATIPQ7Z7H3 387 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 DNAJC5GQ8N7S2 189 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 ZNF274Q96GC6 653 aaPredicted RBP21.32■■□□□ 1
PRDM2-209ENST00000491134 FAM217BQ9NTX9 383 aaPredicted RBP21.32■■□□□ 1
PRDM2-209ENST00000491134 MAD2L2Q9UI95 211 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 SLC12A7Q9Y666 1083 aa21.32■■□□□ 1
PRDM2-209ENST00000491134 PALM3A6NDB9 673 aaPredicted RBP21.31■■□□□ 1
PRDM2-209ENST00000491134 IGF2BP3O00425 579 aaKnown RBP eCLIP21.31■■□□□ 1
PRDM2-209ENST00000491134 BMP3P12645 472 aa21.31■■□□□ 1
PRDM2-209ENST00000491134 INHBEP58166 350 aa21.31■■□□□ 1
PRDM2-209ENST00000491134 FAM83BQ5T0W9 1011 aa21.31■■□□□ 1
PRDM2-209ENST00000491134 ANKRD23Q86SG2 305 aa21.31■■□□□ 1
PRDM2-209ENST00000491134 FAM43AQ8N2R8 423 aa21.31■■□□□ 1
PRDM2-209ENST00000491134 RPAP3Q9H6T3 665 aaPredicted RBP21.31■■□□□ 1
PRDM2-209ENST00000491134 SLC45A1Q9Y2W3 748 aa21.31■■□□□ 1
PRDM2-209ENST00000491134 PLA2G6O60733 806 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 LARGE1O95461 756 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 MAP2K2P36507 400 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 SLC1A4P43007 532 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 SLC35G1Q2M3R5 365 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 BTNL9Q6UXG8 535 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 CATSPERGQ6ZRH7 1159 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 STAG2Q8N3U4 1231 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 FANCBQ8NB91 859 aa21.3■■□□□ 1
PRDM2-209ENST00000491134 A0A0G2JMZ2 1700 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L15C9J2P7 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L13C9JLJ4 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L11C9JVI0 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L18D6R9N7 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L22D6RA61 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L17D6RBQ6 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L19D6RCP7 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L20D6RJB6 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 ZBTB43O43298 467 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 CALM1P0DP23 149 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 CALM2P0DP24 149 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 CALM3P0DP25 149 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 RXRAP19793 462 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 USP17L24Q0WX57 530 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 GRM1Q13255 1194 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 ASPRV1Q53RT3 343 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 POTEEQ6S8J3 1075 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 KCTD1Q719H9 257 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 RAB11FIP4Q86YS3 637 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 IFNL1Q8IU54 200 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 ZCCHC17Q9NP64 241 aaKnown RBP21.29■■□□□ 1
PRDM2-209ENST00000491134 MTMR7Q9Y216 660 aa21.29■■□□□ 1
PRDM2-209ENST00000491134 COL11A1P12107 1806 aaPredicted RBP21.28■■□□□ 1
PRDM2-209ENST00000491134 ST18O60284 1047 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 GOLGA8HP0CJ92 632 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 SREBF2Q12772 1141 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 GPATCH4Q5T3I0 446 aaKnown RBP21.28■■□□□ 1
PRDM2-209ENST00000491134 TTBK2Q6IQ55 1244 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 MICU3Q86XE3 530 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 REM2Q8IYK8 340 aaPredicted RBP21.28■■□□□ 1
PRDM2-209ENST00000491134 CHMP4CQ96CF2 233 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 FBXO28Q9NVF7 368 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 LIMCH1Q9UPQ0 1083 aa21.28■■□□□ 1
PRDM2-209ENST00000491134 FRMPD2Q68DX3 1309 aaPredicted RBP21.28■■□□□ 1
PRDM2-209ENST00000491134 GOLGA8BA8MQT2 603 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 PDHXO00330 501 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 RAD21O60216 631 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 PFKFB2O60825 505 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 PARP1P09874 1014 aaKnown RBP21.27■■□□□ 1
PRDM2-209ENST00000491134 CDC27P30260 824 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 FUT2Q10981 343 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 ME3Q16798 604 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 NUP133Q8WUM0 1156 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 ASCC2Q9H1I8 757 aaPredicted RBP21.27■■□□□ 1
PRDM2-209ENST00000491134 ADAMTS5Q9UNA0 930 aa21.27■■□□□ 1
PRDM2-209ENST00000491134 TMEM232C9JQI7 657 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 ST3GAL1Q11201 340 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 PPP2R5BQ15173 497 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 SYNE3Q6ZMZ3 975 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 NBPF11Q86T75 865 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 CCDC144CPQ8IYA2 1237 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 GPCPD1Q9NPB8 672 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 FEM1BQ9UK73 627 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 MYPNQ86TC9 1320 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 SMCHD1A6NHR9 2005 aa21.26■□□□□ 0.99
PRDM2-209ENST00000491134 GOLGA8AA7E2F4 631 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 KLRF2D3W0D1 207 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 PLEKHA8P1O95397 391 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 METAP2P50579 478 aaKnown RBP eCLIP21.25■□□□□ 0.99
PRDM2-209ENST00000491134 PABPC4Q13310 644 aaKnown RBP eCLIP21.25■□□□□ 0.99
PRDM2-209ENST00000491134 NTRK3Q16288 839 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 CCDC96Q2M329 555 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 LBX2Q6XYB7 198 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 TMTC3Q6ZXV5 915 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 SNX21Q969T3 373 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 TANGO6Q9C0B7 1094 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 CPVLQ9H3G5 476 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 PPP1R9AQ9ULJ8 1098 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 ADGRA2Q96PE1 1338 aa21.25■□□□□ 0.99
PRDM2-209ENST00000491134 MYH6P13533 1939 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms