RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 NOSTRINQ8IVI9 506 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 BICD2Q8TD16 824 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
SMPD4-219ENST00000491128 U2AF2P26368 475 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMPD4-219ENST00000491128 NOVP48745 357 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 NLRP5P59047 1200 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 SAFBQ15424 915 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMPD4-219ENST00000491128 NPY5RQ15761 445 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 PFKFB3Q16875 520 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-219ENST00000491128 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
SMPD4-219ENST00000491128 WWC2Q6AWC2 1192 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 ACER1Q8TDN7 264 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 CCDC17Q96LX7 622 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 ZNF396Q96N95 335 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-219ENST00000491128 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
SMPD4-219ENST00000491128 GLIS2Q9BZE0 524 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-219ENST00000491128 TOB1P50616 345 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-219ENST00000491128 MBD3O95983 291 aa16.05■□□□□ 0.16
SMPD4-219ENST00000491128 TAL1P17542 331 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-219ENST00000491128 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-219ENST00000491128 STK38Q15208 465 aa16.05■□□□□ 0.16
SMPD4-219ENST00000491128 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
SMPD4-219ENST00000491128 DEFB129Q9H1M3 183 aa16.05■□□□□ 0.16
SMPD4-219ENST00000491128 PLIN4Q96Q06 1357 aa16.05■□□□□ 0.16
SMPD4-219ENST00000491128 RPS12P25398 132 aaKnown RBP16.04■□□□□ 0.16
SMPD4-219ENST00000491128 DGKZQ13574 1117 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 PRKG1Q13976 671 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 NBPF12Q5TAG4 269 aaPredicted RBP16.04■□□□□ 0.16
SMPD4-219ENST00000491128 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 COA7Q96BR5 231 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 RCOR1Q9UKL0 485 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 PCDHA7Q9UN72 937 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 PCDHB6Q9Y5E3 794 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 PSME4Q14997 1843 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 H7C1D1 291 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 NR1I2O75469 434 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 KIAA1755Q5JYT7 1200 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 C9orf131Q5VYM1 1079 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 ANO1Q5XXA6 986 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 TMEM179Q6ZVK1 233 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 METTL16Q86W50 562 aaKnown RBP16.04■□□□□ 0.16
SMPD4-219ENST00000491128 DPF2Q92785 391 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 GOLPH3LQ9H4A5 285 aa16.04■□□□□ 0.16
SMPD4-219ENST00000491128 XBP1P17861 261 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 CSPP1Q1MSJ5 1256 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 TEPSINQ96N21 525 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 CLIC6Q96NY7 704 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 DACT1Q9NYF0 836 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 RTEL1Q9NZ71 1219 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 GPRC5DQ9NZD1 345 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 USP17L10C9JJH3 530 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 F5H6K3 240 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 KRT2P35908 639 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 SLC1A4P43007 532 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 KLRC3Q07444 240 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 SLFN13Q68D06 897 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 PIK3AP1Q6ZUJ8 805 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 ADGRF4Q8IZF3 695 aa16.03■□□□□ 0.16
SMPD4-219ENST00000491128 GNAQP50148 359 aa16.02■□□□□ 0.16
SMPD4-219ENST00000491128 ZNF543Q08ER8 600 aa16.02■□□□□ 0.16
SMPD4-219ENST00000491128 MAP3K14Q99558 947 aa16.02■□□□□ 0.16
SMPD4-219ENST00000491128 GGA3Q9NZ52 723 aa16.02■□□□□ 0.16
SMPD4-219ENST00000491128 HERC5Q9UII4 1024 aaKnown RBP16.02■□□□□ 0.16
SMPD4-219ENST00000491128 ELP1O95163 1332 aa16.02■□□□□ 0.15
SMPD4-219ENST00000491128 A0A1B0GVL5 298 aa16.02■□□□□ 0.15
SMPD4-219ENST00000491128 SPTLC2O15270 562 aa16.02■□□□□ 0.15
SMPD4-219ENST00000491128 GPR162Q16538 588 aa16.02■□□□□ 0.15
SMPD4-219ENST00000491128 FAM83AQ86UY5 434 aa16.02■□□□□ 0.15
SMPD4-219ENST00000491128 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.15
SMPD4-219ENST00000491128 SNHG28P0DPA3 235 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 NT5C2P49902 561 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 GRIN1Q05586 938 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 IKQ13123 557 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-219ENST00000491128 GPC2Q8N158 579 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-219ENST00000491128 RRP36Q96EU6 259 aaKnown RBP16.01■□□□□ 0.15
SMPD4-219ENST00000491128 FOXP1Q9H334 677 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-219ENST00000491128 JMJD4Q9H9V9 463 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 ZBTB21Q9ULJ3 1066 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 STXBP3O00186 592 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 NDUFB10O96000 172 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 NAPAP54920 295 aa16.01■□□□□ 0.15
SMPD4-219ENST00000491128 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
SMPD4-219ENST00000491128 TNNI2P48788 182 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 ZNF174Q15697 407 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 CKAP2LQ8IYA6 745 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 SPZ1Q9BXG8 430 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 POLR3EQ9NVU0 708 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 NYAP2Q9P242 653 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 SEC63Q9UGP8 760 aaKnown RBP16■□□□□ 0.15
SMPD4-219ENST00000491128 INPP5BP32019 993 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
SMPD4-219ENST00000491128 CAP2P40123 477 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 NASPP49321 788 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-219ENST00000491128 PTPAQ15257 358 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 ASPRV1Q53RT3 343 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms