RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PDE4DQ08499 809 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 RPS6KA1Q15418 735 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 EP400NLQ6ZTU2 488 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 IQCDQ96DY2 449 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 KRT12Q99456 494 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 NOP53Q9NZM5 478 aaKnown RBP12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 NFU1Q9UMS0 254 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 ZPR1O75312 459 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 ATP1A1P05023 1023 aaKnown RBP12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 GUCY1A3Q02108 690 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 RRAGAQ7L523 313 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 CCHCR1Q8TD31 782 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 BUB1O43683 1085 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 VSIG1Q86XK7 387 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 EPN3Q9H201 632 aa12.52□□□□□ -0.41
CRNKL1-204ENST00000490910 A0A1B0GTH6 734 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 ANKRD62A6NC57 917 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 KCNQ3O43525 872 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 PARP1P09874 1014 aaKnown RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 SCP2P22307 547 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 CRYMQ14894 314 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 TMEM266Q2M3C6 531 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 TCERG1LQ5VWI1 586 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 RNF10Q8N5U6 811 aaKnown RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 WHAMMQ8TF30 809 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 FOXN1O15353 648 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 GTPBP6O43824 516 aaPredicted RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 CTNND1O60716 968 aaKnown RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 TMX4Q9H1E5 349 aaPredicted RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 PLCB1Q9NQ66 1216 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 RTL9Q8NET4 1388 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 MAST3O60307 1309 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 GMNCA6NCL1 334 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 CAPRIN2Q6IMN6 1127 aaKnown RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 CEP120Q8N960 986 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 LRWD1Q9UFC0 647 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 ABCC3O15438 1527 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 NEURL1BA8MQ27 555 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 NR1I3Q14994 352 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 TBC1D1Q86TI0 1168 aaPredicted RBP12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 STAG1Q8WVM7 1258 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 YIPF3Q9GZM5 350 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 SLC4A4Q9Y6R1 1079 aa12.51□□□□□ -0.41
CRNKL1-204ENST00000490910 RGS16O15492 202 aaPredicted RBP12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 UQCRFS1P1P0C7P4 283 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 CALML3P27482 149 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 C6orf163Q5TEZ5 329 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 TAOK1Q7L7X3 1001 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 EEF1GP26641 437 aaKnown RBP12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 LSP1P33241 339 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 ANKLE2Q86XL3 938 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 RETREG2Q8NC44 543 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 KIFC2Q96AC6 838 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 NHEJ1Q9H9Q4 299 aaPredicted RBP12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 RAD21O60216 631 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 PTPREP23469 700 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 KLHL29Q96CT2 875 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 HVCN1Q96D96 273 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 TRIM4Q9C037 500 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 SLC40A1Q9NP59 571 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 TULP4Q9NRJ4 1543 aa12.5□□□□□ -0.41
CRNKL1-204ENST00000490910 B4DLN1 442 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 ALDH3A1P30838 453 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 MEX3CQ5U5Q3 659 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 DAAM2Q86T65 1068 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 P3H4Q92791 437 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 THOC1Q96FV9 657 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 TUBGCP2Q9BSJ2 902 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 FOXP1Q9H334 677 aaPredicted RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 NOVA2Q9UNW9 492 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 V9GY48 417 aaPredicted RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 KCNK3O14649 394 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 MOCS3O95396 460 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms