RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 MOV10L1Q9BXT6 1211 aaKnown RBP18.06■□□□□ 0.48
COL27A1-206ENST00000490831 RNF208Q9H0X6 261 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 UNC93B1Q9H1C4 597 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 DIAPH3Q9NSV4 1193 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 PPP1R9AQ9ULJ8 1098 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
COL27A1-206ENST00000490831 SLC15A5A6NIM6 579 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 NDUFB10O96000 172 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 CAPN2P17655 700 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 PTPREP23469 700 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 RGS2P41220 211 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 NOVP48745 357 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 GRB14Q14449 540 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 FAM83BQ5T0W9 1011 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 TRMT44Q8IYL2 757 aaKnown RBP18.05■□□□□ 0.48
COL27A1-206ENST00000490831 GMCL1P1Q8NEA9 526 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 TRIB2Q92519 343 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 SHISA4Q96DD7 197 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 INCENPQ9NQS7 918 aa18.05■□□□□ 0.48
COL27A1-206ENST00000490831 PAK6Q9NQU5 681 aaPredicted RBP18.05■□□□□ 0.48
COL27A1-206ENST00000490831 HOXC6P09630 235 aa18.04■□□□□ 0.48
COL27A1-206ENST00000490831 PCP11498 1178 aaKnown RBP18.04■□□□□ 0.48
COL27A1-206ENST00000490831 CYP2B6P20813 491 aa18.04■□□□□ 0.48
COL27A1-206ENST00000490831 MAP2K5Q13163 448 aa18.04■□□□□ 0.48
COL27A1-206ENST00000490831 MAP3K21Q5TCX8 1036 aa18.04■□□□□ 0.48
COL27A1-206ENST00000490831 CWC27Q6UX04 472 aaKnown RBP18.04■□□□□ 0.48
COL27A1-206ENST00000490831 APBA2Q99767 749 aa18.04■□□□□ 0.48
COL27A1-206ENST00000490831 IL17RBQ9NRM6 502 aa18.04■□□□□ 0.48
COL27A1-206ENST00000490831 FBXO28Q9NVF7 368 aa18.04■□□□□ 0.48
COL27A1-206ENST00000490831 ZNF236Q9UL36 1845 aa18.03■□□□□ 0.48
COL27A1-206ENST00000490831 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
COL27A1-206ENST00000490831 VWA5AO00534 786 aa18.03■□□□□ 0.48
COL27A1-206ENST00000490831 STRNO43815 780 aa18.03■□□□□ 0.48
COL27A1-206ENST00000490831 TMEM132BQ14DG7 1078 aa18.03■□□□□ 0.48
COL27A1-206ENST00000490831 REPS2Q8NFH8 660 aa18.03■□□□□ 0.48
COL27A1-206ENST00000490831 NBPF3Q9H094 633 aa18.03■□□□□ 0.48
COL27A1-206ENST00000490831 IGHA2P01877 340 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 ERCC3P19447 782 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 UBE2Q1Q7Z7E8 422 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 ABRAQ8N0Z2 381 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 U2AF1L4Q8WU68 220 aaKnown RBP18.02■□□□□ 0.48
COL27A1-206ENST00000490831 STAG1Q8WVM7 1258 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 NUP88Q99567 741 aaPredicted RBP18.02■□□□□ 0.48
COL27A1-206ENST00000490831 SLF1Q9BQI6 1058 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 DSCC1Q9BVC3 393 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 MROH8Q9H579 483 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 CWC22Q9HCG8 908 aaKnown RBP18.02■□□□□ 0.48
COL27A1-206ENST00000490831 TCP11L1Q9NUJ3 509 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 ZNF214Q9UL59 606 aaPredicted RBP18.02■□□□□ 0.48
COL27A1-206ENST00000490831 IVNS1ABPQ9Y6Y0 642 aa18.02■□□□□ 0.48
COL27A1-206ENST00000490831 RPTORQ8N122 1335 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 RAD21O60216 631 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 RANBP6O60518 1105 aaKnown RBP18.01■□□□□ 0.47
COL27A1-206ENST00000490831 SGPL1O95470 568 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 SLC25A27O95847 323 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 NT5C2P49902 561 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 TRIM32Q13049 653 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 AKNAD1Q5T1N1 836 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 RIOX2Q8IUF8 465 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 LRRC47Q8N1G4 583 aaKnown RBP18.01■□□□□ 0.47
COL27A1-206ENST00000490831 PRPF38AQ8NAV1 312 aaKnown RBP18.01■□□□□ 0.47
COL27A1-206ENST00000490831 GMCL1Q96IK5 515 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 CRISPLD2Q9H0B8 497 aa18.01■□□□□ 0.47
COL27A1-206ENST00000490831 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL27A1-206ENST00000490831 RAD50Q92878 1312 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
COL27A1-206ENST00000490831 ATP2A1O14983 1001 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 NMT2O60551 498 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 ZKSCAN1P17029 563 aaPredicted RBP18■□□□□ 0.47
COL27A1-206ENST00000490831 CCL14Q16627 93 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 WDR78Q5VTH9 848 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 SLFN13Q68D06 897 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 TBC1D10CQ8IV04 446 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 IL25Q9H293 177 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 FEM1BQ9UK73 627 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 LAMA4Q16363 1823 aa18■□□□□ 0.47
COL27A1-206ENST00000490831 PLA2G6O60733 806 aa17.99■□□□□ 0.47
COL27A1-206ENST00000490831 COPB2P35606 906 aa17.99■□□□□ 0.47
COL27A1-206ENST00000490831 STAT3P40763 770 aa17.99■□□□□ 0.47
COL27A1-206ENST00000490831 HAND2P61296 217 aa17.99■□□□□ 0.47
COL27A1-206ENST00000490831 PLS1Q14651 629 aa17.99■□□□□ 0.47
COL27A1-206ENST00000490831 MFSD6Q6ZSS7 791 aa17.99■□□□□ 0.47
COL27A1-206ENST00000490831 DEFB118Q96PH6 123 aa17.99■□□□□ 0.47
COL27A1-206ENST00000490831 RNF41Q9H4P4 317 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-206ENST00000490831 HMX1Q9NP08 348 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-206ENST00000490831 ZNF213O14771 459 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 BMP3P12645 472 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 PRKAR2AP13861 404 aaKnown RBP17.98■□□□□ 0.47
COL27A1-206ENST00000490831 CHMLP26374 656 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 ADORA2AP29274 412 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-206ENST00000490831 NCAPG2Q86XI2 1143 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 NPLOC4Q8TAT6 608 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 FLRT1Q9NZU1 646 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 STX8Q9UNK0 236 aa17.98■□□□□ 0.47
COL27A1-206ENST00000490831 FDX1P10109 184 aa17.97■□□□□ 0.47
COL27A1-206ENST00000490831 OLFML2BQ68BL8 750 aa17.97■□□□□ 0.47
COL27A1-206ENST00000490831 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
COL27A1-206ENST00000490831 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.97■□□□□ 0.47
COL27A1-206ENST00000490831 CENPQQ7L2Z9 268 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms