RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 GOLIM4O00461 696 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 RAD21O60216 631 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 HOXD10P28358 340 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 CAP2P40123 477 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 PRMT2P55345 433 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 DYNLL1P63167 89 aaKnown RBP9.04□□□□□ -0.96
CLDN1-202ENST00000490800 SPP2Q13103 211 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 MAPKAPK5Q8IW41 473 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 KBTBD3Q8NAB2 608 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 FSD1Q9BTV5 496 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 C22orf23Q9BZE7 217 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 IL25Q9H293 177 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 PI4KBQ9UBF8 816 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 SRRDQ9UH36 339 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 SLC27A5Q9Y2P5 690 aa9.04□□□□□ -0.96
CLDN1-202ENST00000490800 CFAP99D6REC4 459 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 SGSM2O43147 1006 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 REC8O95072 547 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 CYP7A1P22680 504 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 RBM25P49756 843 aaKnown RBP9.03□□□□□ -0.96
CLDN1-202ENST00000490800 NMIQ13287 307 aaPredicted RBP9.03□□□□□ -0.96
CLDN1-202ENST00000490800 TREML2Q5T2D2 321 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 TICAM2Q86XR7 235 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 FOXP4Q8IVH2 680 aaPredicted RBP9.03□□□□□ -0.96
CLDN1-202ENST00000490800 RAET1EQ8TD07 263 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
CLDN1-202ENST00000490800 USP26Q9BXU7 913 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 DHX36Q9H2U1 1008 aaKnown RBP9.03□□□□□ -0.96
CLDN1-202ENST00000490800 ANTXR1Q9H6X2 564 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 DIAPH3Q9NSV4 1193 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 HERC5Q9UII4 1024 aaKnown RBP9.03□□□□□ -0.96
CLDN1-202ENST00000490800 PALD1Q9ULE6 856 aa9.03□□□□□ -0.96
CLDN1-202ENST00000490800 A0A0D9SFI3 127 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 USP17L5A8MUK1 530 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 IDH1O75874 414 aaKnown RBP9.02□□□□□ -0.97
CLDN1-202ENST00000490800 FCGRTP55899 365 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 JAG1P78504 1218 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 MTFR1Q15390 333 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 CWC27Q6UX04 472 aaKnown RBP9.02□□□□□ -0.97
CLDN1-202ENST00000490800 MIGA1Q8NAN2 632 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 ZNF280CQ8ND82 737 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 SMCR8Q8TEV9 937 aaPredicted RBP9.02□□□□□ -0.97
CLDN1-202ENST00000490800 RUFY2Q8WXA3 655 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 FAM227BQ96M60 508 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 SAP30BPQ9UHR5 308 aaKnown RBP9.02□□□□□ -0.97
CLDN1-202ENST00000490800 GABRQQ9UN88 632 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 AGTPBP1Q9UPW5 1226 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 SLC45A1Q9Y2W3 748 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 MYPNQ86TC9 1320 aa9.02□□□□□ -0.97
CLDN1-202ENST00000490800 BRCA2P51587 3418 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 A6NJR5 290 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 IGSF3O75054 1194 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 CHGBP05060 677 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 GRK4P32298 578 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 ANP32AP39687 249 aaKnown RBP9.01□□□□□ -0.97
CLDN1-202ENST00000490800 HMGCS2P54868 508 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 PRKCZQ05513 592 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 Q3C1V9 767 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-202ENST00000490800 ANKRD13CQ8N6S4 541 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 MAGEB6Q8N7X4 407 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 LSG1Q9H089 658 aaKnown RBP9.01□□□□□ -0.97
CLDN1-202ENST00000490800 DNAJC18Q9H819 358 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 AS3MTQ9HBK9 375 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 ANO2Q9NQ90 1003 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 BIN2Q9UBW5 565 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-202ENST00000490800 FLT1P17948 1338 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 RAD50Q92878 1312 aa9.01□□□□□ -0.97
CLDN1-202ENST00000490800 MKI67P46013 3256 aaKnown RBP9□□□□□ -0.97
CLDN1-202ENST00000490800 PDE4DIPQ5VU43 2346 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 TNPO2O14787 897 aaKnown RBP9□□□□□ -0.97
CLDN1-202ENST00000490800 RNF113AO15541 343 aaKnown RBP9□□□□□ -0.97
CLDN1-202ENST00000490800 GDF11O95390 407 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 USP5P45974 858 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 FLT3LGP49771 235 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 BACE1P56817 501 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 MAP3K12Q12852 859 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 SHROOM1Q2M3G4 852 aaPredicted RBP9□□□□□ -0.97
CLDN1-202ENST00000490800 SLFNL1Q499Z3 407 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 ZMYM1Q5SVZ6 1142 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 THSD4Q6ZMP0 1018 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 METTL16Q86W50 562 aaKnown RBP9□□□□□ -0.97
CLDN1-202ENST00000490800 PRR7Q8TB68 274 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 KIF2CQ99661 725 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 WDR18Q9BV38 432 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 TRIM34Q9BYJ4 488 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 COL2A1P02458 1487 aaPredicted RBP9□□□□□ -0.97
CLDN1-202ENST00000490800 ZSWIM8A7E2V4 1837 aa9□□□□□ -0.97
CLDN1-202ENST00000490800 KIAA0100Q14667 2235 aaKnown RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 EPB41L2O43491 1005 aaKnown RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 ADCY3O60266 1144 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 HLA-DOAP06340 250 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 ZFYP08048 801 aaPredicted RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 ASNSP08243 561 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 CCL5P13501 91 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 UBXN2AP68543 259 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 PTH1RQ03431 593 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms