RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 SMIM22K7EJ46 135 aa21.32■■□□□ 1
YIPF3-208ENST00000490447 SEPT4O43236 478 aa21.32■■□□□ 1
YIPF3-208ENST00000490447 DEFB123Q8N688 67 aa21.32■■□□□ 1
YIPF3-208ENST00000490447 SLC17A8Q8NDX2 589 aa21.32■■□□□ 1
YIPF3-208ENST00000490447 BAZ2AQ9UIF9 1905 aaKnown RBP21.32■■□□□ 1
YIPF3-208ENST00000490447 IGHA2P01877 340 aa21.31■■□□□ 1
YIPF3-208ENST00000490447 TMEM132BQ14DG7 1078 aa21.31■■□□□ 1
YIPF3-208ENST00000490447 ANO1Q5XXA6 986 aa21.31■■□□□ 1
YIPF3-208ENST00000490447 MAML3Q96JK9 1138 aa21.31■■□□□ 1
YIPF3-208ENST00000490447 MMP19Q99542 508 aa21.31■■□□□ 1
YIPF3-208ENST00000490447 RTP1P59025 263 aa21.3■■□□□ 1
YIPF3-208ENST00000490447 C20orf194Q5TEA3 1177 aa21.3■■□□□ 1
YIPF3-208ENST00000490447 MKNK2Q9HBH9 465 aa21.3■■□□□ 1
YIPF3-208ENST00000490447 ATP11BQ9Y2G3 1177 aa21.3■■□□□ 1
YIPF3-208ENST00000490447 KCTD2Q14681 263 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 PRAMEF19Q5SWL8 479 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 FBXO28Q9NVF7 368 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 PPP1R9AQ9ULJ8 1098 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 RLFQ13129 1914 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 COPB2P35606 906 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 STAT3P40763 770 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 Q7L0L9 218 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 RIOX2Q8IUF8 465 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 STK11IPQ8N1F8 1099 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 KBTBD3Q8NAB2 608 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 STRBPQ96SI9 672 aaKnown RBP21.29■■□□□ 1
YIPF3-208ENST00000490447 ADAMTS5Q9UNA0 930 aa21.29■■□□□ 1
YIPF3-208ENST00000490447 MYH7P12883 1935 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 MINDY4BA8MYZ0 360 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 VWA5AO00534 786 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 SBK1Q52WX2 424 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 GIMAP6Q6P9H5 292 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 SLC39A5Q6ZMH5 540 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 APPBP2Q92624 585 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 NRBP1Q9UHY1 535 aa21.28■■□□□ 1
YIPF3-208ENST00000490447 PGK2P07205 417 aa21.27■□□□□ 0.99
YIPF3-208ENST00000490447 ZFYP08048 801 aaPredicted RBP21.27■□□□□ 0.99
YIPF3-208ENST00000490447 RARBP10826 455 aa21.27■□□□□ 0.99
YIPF3-208ENST00000490447 TDO2P48775 406 aa21.27■□□□□ 0.99
YIPF3-208ENST00000490447 LRRFIP1Q32MZ4 808 aaKnown RBP21.27■□□□□ 0.99
YIPF3-208ENST00000490447 ZNF287Q9HBT7 754 aa21.27■□□□□ 0.99
YIPF3-208ENST00000490447 PRDM5Q9NQX1 630 aaPredicted RBP21.27■□□□□ 0.99
YIPF3-208ENST00000490447 GSG1L2A8MUP6 293 aa21.26■□□□□ 0.99
YIPF3-208ENST00000490447 GNAT2P19087 354 aa21.26■□□□□ 0.99
YIPF3-208ENST00000490447 RASA1P20936 1047 aa21.26■□□□□ 0.99
YIPF3-208ENST00000490447 LRRC41Q15345 812 aa21.26■□□□□ 0.99
YIPF3-208ENST00000490447 FAM47AQ5JRC9 791 aa21.26■□□□□ 0.99
YIPF3-208ENST00000490447 SLF1Q9BQI6 1058 aa21.26■□□□□ 0.99
YIPF3-208ENST00000490447 TINF2Q9BSI4 451 aa21.26■□□□□ 0.99
YIPF3-208ENST00000490447 ZNF214Q9UL59 606 aaPredicted RBP21.26■□□□□ 0.99
YIPF3-208ENST00000490447 DIS3Q9Y2L1 958 aaKnown RBP21.26■□□□□ 0.99
YIPF3-208ENST00000490447 CTDP1Q9Y5B0 961 aaPredicted RBP21.26■□□□□ 0.99
YIPF3-208ENST00000490447 LAMA2P24043 3122 aaKnown RBP21.25■□□□□ 0.99
YIPF3-208ENST00000490447 RNF113AO15541 343 aaKnown RBP21.25■□□□□ 0.99
YIPF3-208ENST00000490447 GPAA1O43292 621 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 APPP05067 770 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 ADCYAP1R1P41586 468 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 TSHZ3Q63HK5 1081 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 FERMT2Q96AC1 680 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.25■□□□□ 0.99
YIPF3-208ENST00000490447 DCTPP1Q9H773 170 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 XPNPEP3Q9NQH7 507 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 NYAP2Q9P242 653 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 ROBO3Q96MS0 1386 aa21.25■□□□□ 0.99
YIPF3-208ENST00000490447 F5H6K3 240 aa21.24■□□□□ 0.99
YIPF3-208ENST00000490447 KLRC3Q07444 240 aa21.24■□□□□ 0.99
YIPF3-208ENST00000490447 RNF180Q86T96 592 aa21.24■□□□□ 0.99
YIPF3-208ENST00000490447 ZNF444Q8N0Y2 327 aaPredicted RBP21.24■□□□□ 0.99
YIPF3-208ENST00000490447 NUP88Q99567 741 aaPredicted RBP21.24■□□□□ 0.99
YIPF3-208ENST00000490447 TEX13BQ9BXU2 312 aa21.24■□□□□ 0.99
YIPF3-208ENST00000490447 CNPY2Q9Y2B0 182 aa21.24■□□□□ 0.99
YIPF3-208ENST00000490447 PARP14Q460N5 1801 aa21.23■□□□□ 0.99
YIPF3-208ENST00000490447 ZNF792Q3KQV3 632 aa21.23■□□□□ 0.99
YIPF3-208ENST00000490447 TRIM60Q495X7 471 aa21.23■□□□□ 0.99
YIPF3-208ENST00000490447 SNRNP48Q6IEG0 339 aaKnown RBP21.23■□□□□ 0.99
YIPF3-208ENST00000490447 PRPF38AQ8NAV1 312 aaKnown RBP21.23■□□□□ 0.99
YIPF3-208ENST00000490447 REPS2Q8NFH8 660 aa21.23■□□□□ 0.99
YIPF3-208ENST00000490447 MTMR10Q9NXD2 777 aa21.23■□□□□ 0.99
YIPF3-208ENST00000490447 CLIP2Q9UDT6 1046 aa21.23■□□□□ 0.99
YIPF3-208ENST00000490447 STXBP5LQ9Y2K9 1186 aa21.23■□□□□ 0.99
YIPF3-208ENST00000490447 NDUFB10O96000 172 aa21.22■□□□□ 0.99
YIPF3-208ENST00000490447 AKR1A1P14550 325 aa21.22■□□□□ 0.99
YIPF3-208ENST00000490447 SNX17Q15036 470 aa21.22■□□□□ 0.99
YIPF3-208ENST00000490447 DDX11Q96FC9 970 aa21.22■□□□□ 0.99
YIPF3-208ENST00000490447 COL11A1P12107 1806 aaPredicted RBP21.22■□□□□ 0.99
YIPF3-208ENST00000490447 A0A0C4DFX4 3053 aa21.21■□□□□ 0.99
YIPF3-208ENST00000490447 ZBED4O75132 1171 aa21.21■□□□□ 0.99
YIPF3-208ENST00000490447 SLC4A3P48751 1232 aa21.21■□□□□ 0.99
YIPF3-208ENST00000490447 C1orf53Q5VUE5 145 aa21.21■□□□□ 0.99
YIPF3-208ENST00000490447 NACAP1Q9BZK3 213 aa21.21■□□□□ 0.99
YIPF3-208ENST00000490447 EPB41L4AQ9HCS5 686 aaPredicted RBP21.21■□□□□ 0.99
YIPF3-208ENST00000490447 M0R2C6 588 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 DLL1O00548 723 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 ERC2O15083 957 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 PRDM1O75626 825 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 PGK1P00558 417 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 MSL3Q8N5Y2 521 aaKnown RBP21.2■□□□□ 0.98
YIPF3-208ENST00000490447 KIFC2Q96AC6 838 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms