RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 VGLL2Q8N8G2 317 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 ZNF280CQ8ND82 737 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 GPRC5AQ8NFJ5 357 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 DNAAF4Q8WXU2 420 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 RUNDC1Q96C34 613 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 RBPJLQ9UBG7 517 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 CACNA1BQ00975 2339 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 CACNA1GO43497 2377 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 GRXCR1A8MXD5 290 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 HOXC6P09630 235 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 CYBAP13498 195 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 PRDX5P30044 214 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 HOXA7P31268 230 aaPredicted RBP8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 HERVK_113P62684 666 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 ERVK-9P63128 1117 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 ERVK-24P63145 666 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 MAP2K5Q13163 448 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 RRP1BQ14684 758 aaKnown RBP8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 TAF7LQ5H9L4 462 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 PLEKHH3Q7Z736 793 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 CHMP4AQ9BY43 222 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 DDX4Q9NQI0 724 aaKnown RBP8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 LRRC37A2A6NM11 1700 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 MROH5Q6ZUA9 1318 aa8.99□□□□□ -0.97
PDLIM1-203ENST00000490391 RIF1Q5UIP0 2472 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 GBF1Q92538 1859 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 MYH2Q9UKX2 1941 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 FAM196BA6NMK8 535 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 J3QL48 77 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 NHLH1Q02575 133 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 FPGSQ05932 587 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 FLIIQ13045 1269 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 CAVIN4Q5BKX8 364 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 MFSD14CQ5VZR4 134 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 WDR66Q8TBY9 1149 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 THAP11Q96EK4 314 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 PCGF6Q9BYE7 350 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 TACC3Q9Y6A5 838 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 KIF16BQ96L93 1317 aa8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 PTPRZ1P23471 2315 aaPredicted RBP8.98□□□□□ -0.97
PDLIM1-203ENST00000490391 KBTBD13C9JR72 458 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 ERC2O15083 957 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 CLTBP09497 229 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 IGFBP4P22692 258 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 CYP2C19P33261 490 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 ADCYAP1R1P41586 468 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 IRX3P78415 501 aaPredicted RBP8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 AAK1Q2M2I8 961 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 C16orf59Q7L2K0 433 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 ARRDC4Q8NCT1 418 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 HPS1Q92902 700 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 FERMT2Q96AC1 680 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 EDC3Q96F86 508 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 STK31Q9BXU1 1019 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 TBC1D2Q9BYX2 928 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 GAKO14976 1311 aa8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 MYBBP1AQ9BQG0 1328 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-203ENST00000490391 CACNA1FO60840 1977 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 PI4K2BG5E9Z4 385 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 SMIM22K7EJ46 135 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 PDE8BO95263 885 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 RAG1P15918 1043 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 FGFR2P21802 821 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 CNGA1P29973 690 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 MTMR2Q13614 643 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 LRRC24Q50LG9 513 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 BEND3Q5T5X7 828 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 ANO1Q5XXA6 986 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 ZSCAN29Q8IWY8 852 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 FAM160A2Q8N612 972 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 NPLOC4Q8TAT6 608 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 KAZALD1Q96I82 304 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 OSBPL5Q9H0X9 879 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 CD320Q9NPF0 282 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 SMCHD1A6NHR9 2005 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 VPS13AQ96RL7 3174 aa8.96□□□□□ -0.98
PDLIM1-203ENST00000490391 USP17L5A8MUK1 530 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 PRR33A8MZF0 331 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 GRM8O00222 908 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 CNMDO75829 334 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 CAP2P40123 477 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 BACE1P56817 501 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 PTGDRQ13258 359 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 FKBP5Q13451 457 aaPredicted RBP8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 GRB14Q14449 540 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 LRRC41Q15345 812 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 METTL24Q5JXM2 366 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 TMEM240Q5SV17 173 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 MRGPRX2Q96LB1 330 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 PAGR1Q9BTK6 254 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 WDR18Q9BV38 432 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 PHF24Q9UPV7 400 aa8.95□□□□□ -0.98
PDLIM1-203ENST00000490391 SIPA1L1O43166 1804 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 ZNF236Q9UL36 1845 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 SLC15A5A6NIM6 579 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 SEPT4O43236 478 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 LDHBP07195 334 aaKnown RBP8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 ATP2B2Q01814 1243 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms