RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 POLR3GLQ9BT43 218 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 TMEM60Q9H2L4 133 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 ZNF232Q9UNY5 417 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGC4Q9Y5F7 938 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 USP19O94966 1318 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 LIG1P18858 919 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 FSTL1Q12841 308 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 AAMPQ13685 434 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 NBPF8Q3BBV2 869 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 ATAT1Q5SQI0 421 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.85□□□□□ -1.791e-6■□□□□ 8.7
UBXN4-208ENST00000490163 COPS5Q92905 334 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PTPRN2Q92932 1015 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 WNT10AQ9GZT5 417 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 IFT22Q9H7X7 185 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 GOLGA6CA6NDK9 693 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 GOLGA6BA6NDN3 693 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 CENPBP07199 599 aaPredicted RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 GSTP1P09211 210 aaKnown RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 GOLGA6DP0CG33 693 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 KCNC4Q03721 635 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PPP2R3AQ06190 1150 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PCDH1Q08174 1060 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 SFSWAPQ12872 951 aaKnown RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 FOXD4Q12950 439 aaPredicted RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PCSK7Q16549 785 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 ZNF227Q86WZ6 799 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 SULF2Q8IWU5 870 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 NPLOC4Q8TAT6 608 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 ACSF2Q96CM8 615 aaPredicted RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PTPRHQ9HD43 1115 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 GOLGA6AQ9NYA3 693 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 ZIM2Q9NZV7 527 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 KLF15Q9UIH9 416 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 GIT1Q9Y2X7 761 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PLIN1O60240 522 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 GPR3P46089 330 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 ITKQ08881 620 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 KLF1Q13351 362 aaPredicted RBP3.84□□□□□ -1.79
UBXN4-208ENST00000490163 COL9A3Q14050 684 aaPredicted RBP3.84□□□□□ -1.79
UBXN4-208ENST00000490163 SEPT6Q14141 434 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 AGERQ15109 404 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 MAP3K11Q16584 847 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 SLC6A19Q695T7 634 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 FIGNL1Q6PIW4 674 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 TPTE2Q6XPS3 522 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 C1orf122Q6ZSJ8 110 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.84□□□□□ -1.79
UBXN4-208ENST00000490163 DNAJB8Q8NHS0 232 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 SYTL5Q8TDW5 730 aaPredicted RBP3.84□□□□□ -1.79
UBXN4-208ENST00000490163 RSAD1Q9HA92 442 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 ST7Q9NRC1 585 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 ADGRE2Q9UHX3 823 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 ITIH6Q6UXX5 1313 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 BIVM-ERCC5R4GMW8 1640 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 B4E1Z4 1266 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 CPEP16870 476 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 BBS9Q3SYG4 887 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 INTS11Q5TA45 600 aaKnown RBP3.84□□□□□ -1.79
UBXN4-208ENST00000490163 FCHSD1Q86WN1 690 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 CMTR1Q8N1G2 835 aaKnown RBP3.84□□□□□ -1.79
UBXN4-208ENST00000490163 CNTD1Q8N815 330 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 SLC30A3Q99726 388 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 SLC52A2Q9HAB3 445 aa3.84□□□□□ -1.79
UBXN4-208ENST00000490163 TNPO3Q9Y5L0 923 aaKnown RBP3.84□□□□□ -1.79
UBXN4-208ENST00000490163 TCEA3O75764 348 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 SASH3O75995 380 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 ASGR2P07307 311 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 HOXC12P31275 282 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 PRR16Q569H4 304 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 TLDC1Q6P9B6 456 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 VHLLQ6RSH7 139 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 LRRC69Q6ZNQ3 347 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 LYSMD3Q7Z3D4 306 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 ZNF384Q8TF68 577 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 CPLX3Q8WVH0 158 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 AGBL1Q96MI9 1066 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 TAAR9Q96RI9 348 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 ZFAND3Q9H8U3 227 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 BRD7Q9NPI1 651 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 C1orf112Q9NSG2 853 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 MAP3K20Q9NYL2 800 aaKnown RBP3.83□□□□□ -1.8
UBXN4-208ENST00000490163 NEMP1O14524 444 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 NAT2P11245 290 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 PTPRAP18433 802 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 CEBPAP49715 358 aaPredicted RBP3.83□□□□□ -1.8
UBXN4-208ENST00000490163 RRP12Q5JTH9 1297 aaKnown RBP3.83□□□□□ -1.8
UBXN4-208ENST00000490163 PDXDC1Q6P996 788 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 ABHD17CQ6PCB6 329 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 LINC00528Q8N1L1 170 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 SDR16C5Q8N3Y7 309 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 LMBR1Q8WVP7 490 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 JPH3Q8WXH2 748 aaPredicted RBP3.83□□□□□ -1.8
UBXN4-208ENST00000490163 TTC17Q96AE7 1141 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 NKX2-4Q9H2Z4 354 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 ANLNQ9NQW6 1124 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 LZTS1Q9Y250 596 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 TMEM98Q9Y2Y6 226 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 LOC102724428A0A0B4J2F2 783 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 AOC2O75106 756 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms