RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PDE1AP54750 535 aa11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 CCAR1Q8IX12 1150 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 SPICE1Q8N0Z3 855 aa11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 REPS2Q8NFH8 660 aa11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 PAWRQ96IZ0 340 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 MROH8Q9H579 483 aa11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 FLRT1Q9NZU1 646 aa11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 TRIOBPQ9H2D6 2365 aa11.63□□□□□ -0.55
TMEM39A-210ENST00000490099 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 FLOT1O75955 427 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 COL6A1P12109 1028 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 ERCC3P19447 782 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 ALX1Q15699 326 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 NECAB2Q7Z6G3 386 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 NPLOC4Q8TAT6 608 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 DPF3Q92784 378 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 TANGO6Q9C0B7 1094 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 FBXO28Q9NVF7 368 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 A0A0G2JMZ2 1700 aa11.62□□□□□ -0.55
TMEM39A-210ENST00000490099 F5H6K3 240 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 VWA5AO00534 786 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 COBLO75128 1261 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 FGRP09769 529 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 CCND3P30281 292 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 KLRC3Q07444 240 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 TMEM132BQ14DG7 1078 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 NEDD1Q8NHV4 660 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 DIS3LQ8TF46 1054 aaKnown RBP11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 EVI5LQ96CN4 794 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 FSD1Q9BTV5 496 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 NACAP1Q9BZK3 213 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 MKNK2Q9HBH9 465 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 MTMR4Q9NYA4 1195 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 ANAPC4Q9UJX5 808 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 ZNF214Q9UL59 606 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 PPP1R9AQ9ULJ8 1098 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 NR2E3Q9Y5X4 410 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 PLIN4Q96Q06 1357 aa11.61□□□□□ -0.55
TMEM39A-210ENST00000490099 ATP2A1O14983 1001 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 SLC25A27O95847 323 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 NDUFB10O96000 172 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 ADORA2AP29274 412 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 NOVP48745 357 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 TDO2P48775 406 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 MFSD14CQ5VZR4 134 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 RIOX2Q8IUF8 465 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 ZNF444Q8N0Y2 327 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 TRPV1Q8NER1 839 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 OSBPL3Q9H4L5 887 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 IVNS1ABPQ9Y6Y0 642 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 MYH8P13535 1937 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 PARP14Q460N5 1801 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 ZNF236Q9UL36 1845 aa11.6□□□□□ -0.55
TMEM39A-210ENST00000490099 IGHDP01880 384 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 APPP05067 770 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 CYBAP13498 195 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 PPARAQ07869 468 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 CEP95Q96GE4 821 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 RWDD1Q9H446 243 aaPredicted RBP11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 HELLSQ9NRZ9 838 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 CLIP2Q9UDT6 1046 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 PFASO15067 1338 aa11.59□□□□□ -0.55
TMEM39A-210ENST00000490099 EVI5O60447 810 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 MSCO60682 206 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 PRDM1O75626 825 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 FCER1AP12319 257 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 CYP2C19P33261 490 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 STAT3P40763 770 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 FXR1P51114 621 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 NUCB1Q02818 461 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 PDE4BQ07343 736 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 WDR78Q5VTH9 848 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 DPP9Q86TI2 863 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 PRPF38AQ8NAV1 312 aaKnown RBP11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 NAPBQ9H115 298 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 C11orf49Q9H6J7 331 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 DDX20Q9UHI6 824 aaKnown RBP11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 TACC3Q9Y6A5 838 aa11.58□□□□□ -0.56
TMEM39A-210ENST00000490099 DNAJC25-GNG10A0A024R161 153 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 ORC4O43929 436 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 TTLL1O95922 423 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 SLC3A2P08195 630 aaKnown RBP11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 COPB2P35606 906 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 TFAP4Q01664 338 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms