RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 USP5P45974 858 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 EPHA4P54764 986 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 GNL2Q13823 731 aaKnown RBP6.39□□□□□ -1.39
IFRD1-215ENST00000489994 PDCD2Q16342 344 aaPredicted RBP6.39□□□□□ -1.39
IFRD1-215ENST00000489994 FXNQ16595 210 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 EFHC2Q5JST6 749 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 TBCELQ5QJ74 424 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 AP1ARQ63HQ0 302 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 METTL16Q86W50 562 aaKnown RBP6.39□□□□□ -1.39
IFRD1-215ENST00000489994 SLC9A9Q8IVB4 645 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 CCDC191Q8NCU4 936 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 NEK9Q8TD19 979 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 ATRIPQ8WXE1 791 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 CENPTQ96BT3 561 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 CDK5RAP3Q96JB5 506 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 TRERF1Q96PN7 1200 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 COL25A1Q9BXS0 654 aaPredicted RBP6.39□□□□□ -1.39
IFRD1-215ENST00000489994 TRIM6Q9C030 488 aaPredicted RBP6.39□□□□□ -1.39
IFRD1-215ENST00000489994 NIF3L1Q9GZT8 377 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 DHX36Q9H2U1 1008 aaKnown RBP6.39□□□□□ -1.39
IFRD1-215ENST00000489994 TRPV5Q9NQA5 729 aa6.39□□□□□ -1.39
IFRD1-215ENST00000489994 PIK3C2GO75747 1445 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 FSD2A1L4K1 749 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 TNFRSF10BO14763 440 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 GPR182O15218 404 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 VAMP4O75379 141 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 S100BP04271 92 aaPredicted RBP6.38□□□□□ -1.39
IFRD1-215ENST00000489994 TATP17735 454 aaPredicted RBP6.38□□□□□ -1.39
IFRD1-215ENST00000489994 HOXD10P28358 340 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 PIK3CAP42336 1068 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 FANCCQ00597 558 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 FOXK2Q01167 660 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 PRPF4BQ13523 1007 aaKnown RBP6.38□□□□□ -1.39
IFRD1-215ENST00000489994 SEPT2Q15019 361 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 NFE2L2Q16236 605 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 CCDC178Q5BJE1 867 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 SYNE3Q6ZMZ3 975 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 RELL1Q8IUW5 271 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 ALKBH8Q96BT7 664 aaKnown RBP6.38□□□□□ -1.39
IFRD1-215ENST00000489994 C2orf49Q9BVC5 232 aaPredicted RBP6.38□□□□□ -1.39
IFRD1-215ENST00000489994 RASSF4Q9H2L5 321 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 UNC45AQ9H3U1 944 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 CD248Q9HCU0 757 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 RNF19AQ9NV58 838 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 IP6K2Q9UHH9 426 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 SLC45A1Q9Y2W3 748 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 ITSN1Q15811 1721 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 PEAK1Q9H792 1746 aa6.38□□□□□ -1.39
IFRD1-215ENST00000489994 PARP4Q9UKK3 1724 aaKnown RBP6.38□□□□□ -1.39
IFRD1-215ENST00000489994 MYOM1P52179 1685 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 PARD3Q8TEW0 1356 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 PNMA6FA0A0J9YX94 578 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 ATP2B1P20020 1258 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 PDE6BP35913 854 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 MECOMQ03112 1051 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 EIF2B5Q13144 721 aaKnown RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 TEAD4Q15561 434 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 INF2Q27J81 1249 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 MCTP2Q6DN12 878 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 ALG1LQ6GMV1 187 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 NCAPG2Q86XI2 1143 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 RBM12BQ8IXT5 1001 aaKnown RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 RPUSD2Q8IZ73 545 aaKnown RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 SAMD14Q8IZD0 417 aaPredicted RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 NLGN1Q8N2Q7 840 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 UHMK1Q8TAS1 419 aaKnown RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 CNTNAP3BQ96NU0 1288 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 TACO1Q9BSH4 297 aaKnown RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 TINF2Q9BSI4 451 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 CNTNAP3Q9BZ76 1288 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 BRINP2Q9C0B6 783 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 PDGFDQ9GZP0 370 aaPredicted RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 GINM1Q9NU53 330 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 ZDHHC3Q9NYG2 299 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 CPSF2Q9P2I0 782 aaKnown RBP6.37□□□□□ -1.39
IFRD1-215ENST00000489994 PRKAG2Q9UGJ0 569 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 USP3Q9Y6I4 520 aa6.37□□□□□ -1.39
IFRD1-215ENST00000489994 SLC27A2O14975 620 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 KRT38O76015 456 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 RBP3P10745 1247 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 NOS2P35228 1153 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 PSMA6P60900 246 aaKnown RBP6.36□□□□□ -1.39
IFRD1-215ENST00000489994 SLC7A5Q01650 507 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 ENOX2Q16206 610 aaKnown RBP6.36□□□□□ -1.39
IFRD1-215ENST00000489994 FAM196AQ6ZSG2 479 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 EFCAB13Q8IY85 973 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 ZNF295-AS1Q8N0V1 137 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 STK11IPQ8N1F8 1099 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 CCDC89Q8N998 374 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 TRIML1Q8N9V2 468 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.36□□□□□ -1.39
IFRD1-215ENST00000489994 SLC43A3Q8NBI5 491 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 GTPBP3Q969Y2 492 aaKnown RBP6.36□□□□□ -1.39
IFRD1-215ENST00000489994 SETDB2Q96T68 719 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 MKS1Q9NXB0 559 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
IFRD1-215ENST00000489994 PHF24Q9UPV7 400 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms