RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 MYRIPQ8NFW9 859 aa10.97□□□□□ -0.65
RAB3GAP1-205ENST00000489858 WDR66Q8TBY9 1149 aa10.97□□□□□ -0.65
RAB3GAP1-205ENST00000489858 GRAPLQ8TC17 118 aaPredicted RBP10.97□□□□□ -0.65
RAB3GAP1-205ENST00000489858 ZNF384Q8TF68 577 aa10.97□□□□□ -0.65
RAB3GAP1-205ENST00000489858 TUBE1Q9UJT0 475 aa10.97□□□□□ -0.65
RAB3GAP1-205ENST00000489858 LEMD3Q9Y2U8 911 aa10.97□□□□□ -0.65
RAB3GAP1-205ENST00000489858 UBR3Q6ZT12 1888 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 ROBO3Q96MS0 1386 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 XDHP47989 1333 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 IRS2Q9Y4H2 1338 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 A0A087WWV3 80 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 CYP2D7A0A087X1C5 515 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 USP17L12C9JPN9 530 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 USP17L21D6R901 530 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 UBE2Q2LH0YL09 131 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 BIN1O00499 593 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 MYO1BO43795 1136 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 TRAPPC3LQ5T215 181 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 MEX3CQ5U5Q3 659 aaKnown RBP10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 KRBA2Q6ZNG9 492 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 TMTC3Q6ZXV5 915 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 SMIM5Q71RC9 77 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 AMOTL1Q8IY63 956 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 CNNM3Q8NE01 707 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 CTCFLQ8NI51 663 aaPredicted RBP10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 ERCC4Q92889 916 aaPredicted RBP10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 CCDC34Q96HJ3 373 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 DCP1AQ9NPI6 582 aaPredicted RBP10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 AATFQ9NY61 560 aaKnown RBP eCLIP10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 IMPACTQ9P2X3 320 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 FBXO2Q9UK22 296 aaPredicted RBP10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 KCNH3Q9ULD8 1083 aa10.96□□□□□ -0.65
RAB3GAP1-205ENST00000489858 LRRC37AA6NMS7 1700 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CNTNAP5Q8WYK1 1306 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 TRIM75PA6NK02 468 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CBFA2T2O43439 604 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 ACTN4O43707 911 aaKnown RBP10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 PRDM1O75626 825 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 LDHBP07195 334 aaKnown RBP10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 PRDX5P30044 214 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 TM4SF1P30408 202 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 FUT2Q10981 343 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CCDC144BQ3MJ40 725 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CCDC178Q5BJE1 867 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 KANK3Q6NY19 840 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 C15orf52Q6ZUT6 534 aaKnown RBP10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CERS3Q8IU89 383 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CCDC82Q8N4S0 544 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CCDC150Q8NCX0 1101 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 RPGRQ92834 1020 aaKnown RBP10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CLIC6Q96NY7 704 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 NRBP1Q9UHY1 535 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 DACH1Q9UI36 760 aa10.95□□□□□ -0.66
RAB3GAP1-205ENST00000489858 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 RRP9O43818 475 aaKnown RBP10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 NRDCO43847 1150 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 SMC2O95347 1197 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 PLEKHA8P1O95397 391 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 LDHCP07864 332 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 KIF5BP33176 963 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 USP5P45974 858 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 ST5P78524 1137 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 MYL5Q02045 173 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 TROAPQ12815 778 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 LRMPQ12912 555 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 NR5A1Q13285 461 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 PNOCQ13519 176 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 NFIXQ14938 502 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 KMT5BQ4FZB7 885 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 FAM196AQ6ZSG2 479 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 METTL16Q86W50 562 aaKnown RBP10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CMTR1Q8N1G2 835 aaKnown RBP10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CCDC24Q8N4L8 307 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CACTINQ8WUQ7 758 aaKnown RBP10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 VPS54Q9P1Q0 977 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 ANKIB1Q9P2G1 1089 aa10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 SRPRBQ9Y5M8 271 aaKnown RBP10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 DDX60LQ5H9U9 1706 aaKnown RBP10.94□□□□□ -0.66
RAB3GAP1-205ENST00000489858 RCCD1A6NED2 376 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 TSPY2A6NKD2 308 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 BAG3O95817 575 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 CYP2D6P10635 497 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 PKN1Q16512 942 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 FILIP1Q7Z7B0 1213 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 FERMT2Q96AC1 680 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 OSBPL5Q9H0X9 879 aaPredicted RBP10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 IFNKQ9P0W0 207 aa10.93□□□□□ -0.66
RAB3GAP1-205ENST00000489858 AFF2P51816 1311 aa10.92□□□□□ -0.66
RAB3GAP1-205ENST00000489858 SMIM22K7EJ46 135 aa10.92□□□□□ -0.66
RAB3GAP1-205ENST00000489858 SCG2P13521 617 aa10.92□□□□□ -0.66
RAB3GAP1-205ENST00000489858 ATP2B4P23634 1241 aa10.92□□□□□ -0.66
RAB3GAP1-205ENST00000489858 GTF2F1P35269 517 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAB3GAP1-205ENST00000489858 SLC19A1P41440 591 aa10.92□□□□□ -0.66
RAB3GAP1-205ENST00000489858 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
RAB3GAP1-205ENST00000489858 GNAQP50148 359 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms