RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 FBXO28Q9NVF7 368 aa18.11■□□□□ 0.49
FAM3D-204ENST00000489857 TRIM43BA6NCK2 446 aa18.1■□□□□ 0.49
FAM3D-204ENST00000489857 USP17L12C9JPN9 530 aa18.1■□□□□ 0.49
FAM3D-204ENST00000489857 USP17L21D6R901 530 aa18.1■□□□□ 0.49
FAM3D-204ENST00000489857 C16orf86Q6ZW13 317 aa18.1■□□□□ 0.49
FAM3D-204ENST00000489857 BADQ92934 168 aa18.1■□□□□ 0.49
FAM3D-204ENST00000489857 TRIM43Q96BQ3 446 aaPredicted RBP18.1■□□□□ 0.49
FAM3D-204ENST00000489857 ADAMTS5Q9UNA0 930 aa18.1■□□□□ 0.49
FAM3D-204ENST00000489857 SLC25A27O95847 323 aa18.09■□□□□ 0.49
FAM3D-204ENST00000489857 PGK2P07205 417 aa18.09■□□□□ 0.49
FAM3D-204ENST00000489857 EEF2P13639 858 aaKnown RBP18.09■□□□□ 0.49
FAM3D-204ENST00000489857 ATP5JP18859 108 aa18.09■□□□□ 0.49
FAM3D-204ENST00000489857 ZNF697Q5TEC3 545 aa18.09■□□□□ 0.49
FAM3D-204ENST00000489857 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.09■□□□□ 0.49
FAM3D-204ENST00000489857 COL25A1Q9BXS0 654 aaPredicted RBP18.09■□□□□ 0.49
FAM3D-204ENST00000489857 PARP14Q460N5 1801 aa18.09■□□□□ 0.49
FAM3D-204ENST00000489857 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
FAM3D-204ENST00000489857 RAB11FIP3O75154 756 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 HMMRO75330 724 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 C1orf53Q5VUE5 145 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 RIOX2Q8IUF8 465 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 MMP19Q99542 508 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 HAUS7Q99871 368 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 XPNPEP3Q9NQH7 507 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 ZBTB40Q9NUA8 1239 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 NRBP1Q9UHY1 535 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 PHF24Q9UPV7 400 aa18.08■□□□□ 0.48
FAM3D-204ENST00000489857 BAZ2AQ9UIF9 1905 aaKnown RBP18.08■□□□□ 0.48
FAM3D-204ENST00000489857 TAL1P17542 331 aaPredicted RBP18.07■□□□□ 0.48
FAM3D-204ENST00000489857 TLE2Q04725 743 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 UBE3CQ15386 1083 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 ZNF792Q3KQV3 632 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 CDX2Q99626 313 aaPredicted RBP18.07■□□□□ 0.48
FAM3D-204ENST00000489857 TINF2Q9BSI4 451 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.07■□□□□ 0.48
FAM3D-204ENST00000489857 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.07■□□□□ 0.48
FAM3D-204ENST00000489857 KANSL2Q9H9L4 492 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 ZNF214Q9UL59 606 aaPredicted RBP18.07■□□□□ 0.48
FAM3D-204ENST00000489857 PPP1R9AQ9ULJ8 1098 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 COG6Q9Y2V7 657 aa18.07■□□□□ 0.48
FAM3D-204ENST00000489857 MYH8P13535 1937 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 VWA5AO00534 786 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 RARBP10826 455 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 ITGB8P26012 769 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 STAT3P40763 770 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 KCTD2Q14681 263 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 FAM83BQ5T0W9 1011 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 CTR9Q6PD62 1173 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 AMOTL1Q8IY63 956 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 SLC4A4Q9Y6R1 1079 aa18.06■□□□□ 0.48
FAM3D-204ENST00000489857 ROBO3Q96MS0 1386 aa18.05■□□□□ 0.48
FAM3D-204ENST00000489857 PGK1P00558 417 aa18.05■□□□□ 0.48
FAM3D-204ENST00000489857 ZNF865P0CJ78 1059 aaPredicted RBP18.05■□□□□ 0.48
FAM3D-204ENST00000489857 MS4A1P11836 297 aa18.05■□□□□ 0.48
FAM3D-204ENST00000489857 MIER1Q8N108 512 aa18.05■□□□□ 0.48
FAM3D-204ENST00000489857 LENG1Q96BZ8 264 aaPredicted RBP18.05■□□□□ 0.48
FAM3D-204ENST00000489857 PUS7LQ9H0K6 701 aaKnown RBP18.05■□□□□ 0.48
FAM3D-204ENST00000489857 TTYH1Q9H313 450 aaPredicted RBP18.05■□□□□ 0.48
FAM3D-204ENST00000489857 SEMA6BQ9H3T3 888 aa18.05■□□□□ 0.48
FAM3D-204ENST00000489857 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
FAM3D-204ENST00000489857 DIS3Q9Y2L1 958 aaKnown RBP18.05■□□□□ 0.48
FAM3D-204ENST00000489857 LAMA2P24043 3122 aaKnown RBP18.05■□□□□ 0.48
FAM3D-204ENST00000489857 COL11A1P12107 1806 aaPredicted RBP18.05■□□□□ 0.48
FAM3D-204ENST00000489857 UNC80Q8N2C7 3258 aa18.04■□□□□ 0.48
FAM3D-204ENST00000489857 EPHB4P54760 987 aa18.04■□□□□ 0.48
FAM3D-204ENST00000489857 SMAD3P84022 425 aaKnown RBP18.04■□□□□ 0.48
FAM3D-204ENST00000489857 DDRGK1Q96HY6 314 aa18.04■□□□□ 0.48
FAM3D-204ENST00000489857 GOPCQ9HD26 462 aa18.04■□□□□ 0.48
FAM3D-204ENST00000489857 A0A1W2PQ45 241 aaPredicted RBP18.03■□□□□ 0.48
FAM3D-204ENST00000489857 A0A1W2PQY0 241 aa18.03■□□□□ 0.48
FAM3D-204ENST00000489857 RAD21O60216 631 aa18.03■□□□□ 0.48
FAM3D-204ENST00000489857 ADAMTS4O75173 837 aa18.03■□□□□ 0.48
FAM3D-204ENST00000489857 CLTBP09497 229 aa18.03■□□□□ 0.48
FAM3D-204ENST00000489857 RNF180Q86T96 592 aa18.03■□□□□ 0.48
FAM3D-204ENST00000489857 NUP88Q99567 741 aaPredicted RBP18.03■□□□□ 0.48
FAM3D-204ENST00000489857 TACC3Q9Y6A5 838 aa18.03■□□□□ 0.48
FAM3D-204ENST00000489857 ZNFX1Q9P2E3 1918 aaKnown RBP18.02■□□□□ 0.48
FAM3D-204ENST00000489857 SMCHD1A6NHR9 2005 aa18.02■□□□□ 0.48
FAM3D-204ENST00000489857 KIAA0355O15063 1070 aa18.02■□□□□ 0.48
FAM3D-204ENST00000489857 AKR1A1P14550 325 aa18.02■□□□□ 0.48
FAM3D-204ENST00000489857 COPB2P35606 906 aa18.02■□□□□ 0.48
FAM3D-204ENST00000489857 MYLIPQ8WY64 445 aa18.02■□□□□ 0.48
FAM3D-204ENST00000489857 ARPP21Q9UBL0 812 aaPredicted RBP18.02■□□□□ 0.48
FAM3D-204ENST00000489857 PQBP1O60828 265 aaKnown RBP18.01■□□□□ 0.47
FAM3D-204ENST00000489857 RASA1P20936 1047 aa18.01■□□□□ 0.47
FAM3D-204ENST00000489857 ZSCAN25Q6NSZ9 544 aa18.01■□□□□ 0.47
FAM3D-204ENST00000489857 MAFAQ8NHW3 353 aaPredicted RBP18.01■□□□□ 0.47
FAM3D-204ENST00000489857 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
FAM3D-204ENST00000489857 SLF1Q9BQI6 1058 aa18.01■□□□□ 0.47
FAM3D-204ENST00000489857 TEX13BQ9BXU2 312 aa18.01■□□□□ 0.47
FAM3D-204ENST00000489857 CNPY2Q9Y2B0 182 aa18.01■□□□□ 0.47
FAM3D-204ENST00000489857 RIPK3Q9Y572 518 aa18.01■□□□□ 0.47
FAM3D-204ENST00000489857 GREB1LQ9C091 1923 aaPredicted RBP18.01■□□□□ 0.47
FAM3D-204ENST00000489857 SMARCA5O60264 1052 aaPredicted RBP18■□□□□ 0.47
FAM3D-204ENST00000489857 SNAI1O95863 264 aaPredicted RBP18■□□□□ 0.47
FAM3D-204ENST00000489857 SBK1Q52WX2 424 aa18■□□□□ 0.47
FAM3D-204ENST00000489857 SNRNP48Q6IEG0 339 aaKnown RBP18■□□□□ 0.47
FAM3D-204ENST00000489857 STK11IPQ8N1F8 1099 aa18■□□□□ 0.47
FAM3D-204ENST00000489857 RNPC3Q96LT9 517 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms