RNA–Protein interactions for RNA: ENST00000489769.1

SERPINA1-210, Transcript of serpin family A member 1, humanhuman

TSL 1 (best)

Gene SERPINA1, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-210ENST00000489769 CA12O43570 354 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 OSBPP22059 807 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 WTAPQ15007 396 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 CCDC178Q5BJE1 867 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 IFIT1BQ5T764 474 aaKnown RBP13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 CATSPERGQ6ZRH7 1159 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 DHX32Q7L7V1 743 aaKnown RBP13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 LPAR1Q92633 364 aa13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 FRMPD2Q68DX3 1309 aaPredicted RBP13.38□□□□□ -0.27
SERPINA1-210ENST00000489769 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 HOXA7P31268 230 aaPredicted RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 SLC1A4P43007 532 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 NT5C2P49902 561 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 SART3Q15020 963 aaKnown RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 KCTD1Q719H9 257 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 PNMA1Q8ND90 353 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 ANKS1AQ92625 1134 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 UPF3BQ9BZI7 483 aaKnown RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 LY9Q9HBG7 655 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 ZFYVE28Q9HCC9 887 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 CPA4Q9UI42 421 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 ZSWIM8A7E2V4 1837 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 MGAMO43451 1857 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 SH2B2O14492 632 aaPredicted RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 FLOT1O75955 427 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 GOLGA8HP0CJ92 632 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 CCDC96Q2M329 555 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 POTEEQ6S8J3 1075 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 NFXL1Q6ZNB6 911 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 PARK7Q99497 189 aaKnown RBP13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 SLC45A1Q9Y2W3 748 aa13.37□□□□□ -0.27
SERPINA1-210ENST00000489769 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 BMP3P12645 472 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 PSMA5P28066 241 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 DDIT3P35638 169 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 HERVK_113P62684 666 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 COG2Q14746 738 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 Q6ZUG5 572 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 RAB11FIP4Q86YS3 637 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 ANKRD13CQ8N6S4 541 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 MYL10Q9BUA6 226 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 ZCCHC17Q9NP64 241 aaKnown RBP13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
SERPINA1-210ENST00000489769 TLR2O60603 784 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 PDHBP11177 359 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 RPS6KB1P23443 525 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 SLC16A2P36021 539 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 FGD1P98174 961 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 RUFY3Q7L099 469 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 GMCL1Q96IK5 515 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
SERPINA1-210ENST00000489769 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 SPDYE16A6NNV3 312 aaPredicted RBP13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 GPR25O00155 361 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 RXRAP19793 462 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 MRE11P49959 708 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 LBX1P52954 281 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 DCAF4Q8WV16 495 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 KIFC2Q96AC6 838 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 ATG4CQ96DT6 458 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 PAGR1Q9BTK6 254 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 TXNRD2Q9NNW7 524 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 CYP46A1Q9Y6A2 500 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
SERPINA1-210ENST00000489769 HSPA8P11142 646 aaKnown RBP13.33□□□□□ -0.28
SERPINA1-210ENST00000489769 DSG3P32926 999 aa13.33□□□□□ -0.28
SERPINA1-210ENST00000489769 ANAPC15P60006 121 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms