RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 CAPN2P17655 700 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 DSG3P32926 999 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 CACNB2Q08289 660 aaPredicted RBP13.93□□□□□ -0.18
GGPS1-207ENST00000489692 SIAH1Q8IUQ4 282 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 MB21D1Q8N884 522 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 KIF2CQ99661 725 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 MOV10L1Q9BXT6 1211 aaKnown RBP13.93□□□□□ -0.18
GGPS1-207ENST00000489692 SPATC1LQ9H0A9 340 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 TRIM6-TRIM34B2RNG4 842 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 ERCC3P19447 782 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 RASA1P20936 1047 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 PDE4BQ07343 736 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 FAM83BQ5T0W9 1011 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 CCDC129Q6ZRS4 1044 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 IFNL3Q8IZI9 196 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 DIS3LQ8TF46 1054 aaKnown RBP13.92□□□□□ -0.18
GGPS1-207ENST00000489692 EVI5LQ96CN4 794 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 EPB41L4AQ9HCS5 686 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-207ENST00000489692 SLC5A4Q9NY91 659 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 CLIP2Q9UDT6 1046 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 ATAD5Q96QE3 1844 aa13.92□□□□□ -0.18
GGPS1-207ENST00000489692 BRCA2P51587 3418 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 EPB41L2O43491 1005 aaKnown RBP13.91□□□□□ -0.18
GGPS1-207ENST00000489692 SLC34A2O95436 690 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 TSPY3P0CV98 308 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 TSPY8P0CW00 308 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 ADORA2AP29274 412 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 CCND3P30281 292 aaPredicted RBP13.91□□□□□ -0.18
GGPS1-207ENST00000489692 RABEP1Q15276 862 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
GGPS1-207ENST00000489692 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 USP6NLQ92738 828 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 CRISPLD2Q9H0B8 497 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 COLQQ9Y215 455 aaPredicted RBP13.91□□□□□ -0.18
GGPS1-207ENST00000489692 MYH1P12882 1939 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 NAV1Q8NEY1 1877 aa13.91□□□□□ -0.18
GGPS1-207ENST00000489692 FOCADQ5VW36 1801 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 PTPRFP10586 1907 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 STRNO43815 780 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
GGPS1-207ENST00000489692 CYP2C19P33261 490 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 PPARAQ07869 468 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 GRB14Q14449 540 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 UBE2Q1Q7Z7E8 422 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 SHCBP1Q8NEM2 672 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 NUP88Q99567 741 aaPredicted RBP13.9□□□□□ -0.18
GGPS1-207ENST00000489692 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 MROH8Q9H579 483 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 C11orf49Q9H6J7 331 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 TOMM22Q9NS69 142 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
GGPS1-207ENST00000489692 FCER1AP12319 257 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 MAP3K21Q5TCX8 1036 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 LRRC47Q8N1G4 583 aaKnown RBP13.89□□□□□ -0.19
GGPS1-207ENST00000489692 IL27Q8NEV9 243 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.89□□□□□ -0.19
GGPS1-207ENST00000489692 FLRT1Q9NZU1 646 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 NYAP2Q9P242 653 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-207ENST00000489692 CDK5RAP2Q96SN8 1893 aa13.89□□□□□ -0.19
GGPS1-207ENST00000489692 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 F5H6K3 240 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 SLC25A27O95847 323 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 TTLL1O95922 423 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 NDUFB10O96000 172 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 STAT3P40763 770 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 TFAP4Q01664 338 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 KLRC3Q07444 240 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 IKQ13123 557 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-207ENST00000489692 KCTD2Q14681 263 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 C7orf61Q8IZ16 206 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 KIFC2Q96AC6 838 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 CEP95Q96GE4 821 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 MMP19Q99542 508 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 SLF1Q9BQI6 1058 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
GGPS1-207ENST00000489692 DDX60LQ5H9U9 1706 aaKnown RBP13.87□□□□□ -0.19
GGPS1-207ENST00000489692 ROBO3Q96MS0 1386 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 VWA5AO00534 786 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 ZBED4O75132 1171 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 HOXC6P09630 235 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 DDIT3P35638 169 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 CTDSPL2Q05D32 466 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 CPXCR1Q8N123 301 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 IL17RAQ96F46 866 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 SLKQ9H2G2 1235 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-207ENST00000489692 HELLSQ9NRZ9 838 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 MTMR4Q9NYA4 1195 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 ZMYND8Q9ULU4 1186 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-207ENST00000489692 STX8Q9UNK0 236 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms