RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SPECC1Q5M775 1068 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 SP8Q8IXZ3 490 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 BLIDQ8IZY5 108 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 IQUBQ8NA54 791 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 CCDC12Q8WUD4 166 aaPredicted RBP17.02■□□□□ 0.32
COL9A1-208ENST00000489611 C16orf45Q96MC5 204 aaPredicted RBP17.02■□□□□ 0.32
COL9A1-208ENST00000489611 IL17RBQ9NRM6 502 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 PCDHA4Q9UN74 947 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
COL9A1-208ENST00000489611 H0YIN7 160 aa17.02■□□□□ 0.31
COL9A1-208ENST00000489611 LAD1O00515 517 aa17.02■□□□□ 0.31
COL9A1-208ENST00000489611 LONP1P36776 959 aaKnown RBP17.02■□□□□ 0.31
COL9A1-208ENST00000489611 PLCD1P51178 756 aa17.02■□□□□ 0.31
COL9A1-208ENST00000489611 PTGDRQ13258 359 aa17.02■□□□□ 0.31
COL9A1-208ENST00000489611 NYAP1Q6ZVC0 841 aa17.02■□□□□ 0.31
COL9A1-208ENST00000489611 CCAR2Q8N163 923 aaKnown RBP17.02■□□□□ 0.31
COL9A1-208ENST00000489611 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.31
COL9A1-208ENST00000489611 POLLQ9UGP5 575 aa17.02■□□□□ 0.31
COL9A1-208ENST00000489611 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-208ENST00000489611 FAM205AQ6ZU69 1335 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 FOCADQ5VW36 1801 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 CTIFO43310 598 aaKnown RBP17.01■□□□□ 0.31
COL9A1-208ENST00000489611 BMP6P22004 513 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 TXLNAP40222 546 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 ISM2Q6H9L7 571 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 C16orf86Q6ZW13 317 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 VSTM4Q8IW00 320 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 FANCLQ9NW38 375 aa17.01■□□□□ 0.31
COL9A1-208ENST00000489611 GAKO14976 1311 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 ZNF18P17022 549 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 BTDP43251 543 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 ILDR2Q71H61 639 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 TBC1D16Q8TBP0 767 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 SYMPKQ92797 1274 aaKnown RBP17■□□□□ 0.31
COL9A1-208ENST00000489611 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 JAG2Q9Y219 1238 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 LTBP1Q14766 1721 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 RIOK3O14730 519 aaKnown RBP17■□□□□ 0.31
COL9A1-208ENST00000489611 TOP1P11387 765 aaKnown RBP17■□□□□ 0.31
COL9A1-208ENST00000489611 ATP1A3P13637 1013 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 R3HDM1Q15032 1099 aaKnown RBP17■□□□□ 0.31
COL9A1-208ENST00000489611 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 EARS2Q5JPH6 523 aaKnown RBP17■□□□□ 0.31
COL9A1-208ENST00000489611 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 PDILTQ8N807 584 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 NEDD1Q8NHV4 660 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 DHX58Q96C10 678 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 MAD2L2Q9UI95 211 aa17■□□□□ 0.31
COL9A1-208ENST00000489611 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
COL9A1-208ENST00000489611 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 PALM3A6NDB9 673 aaPredicted RBP16.99■□□□□ 0.31
COL9A1-208ENST00000489611 C6orf229H3BNL8 230 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 MYL1P05976 194 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 RASA1P20936 1047 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 ZNF174Q15697 407 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 ARMCX5Q6P1M9 558 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 PAGE5Q96GU1 130 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 CTAGE1Q96RT6 745 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 NFE2L3Q9Y4A8 694 aa16.99■□□□□ 0.31
COL9A1-208ENST00000489611 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 hCG_1984214I3L0E3 225 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 FOXN1O15353 648 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 CDK11BP21127 795 aaKnown RBP16.98■□□□□ 0.31
COL9A1-208ENST00000489611 DPYDQ12882 1025 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 ORC2Q13416 577 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-208ENST00000489611 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 MFSD14BQ5SR56 506 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 STYK1Q6J9G0 422 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 ZNF713Q8N859 430 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-208ENST00000489611 KIF18AQ8NI77 898 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 EPSTI1Q96J88 318 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 RMND1Q9NWS8 449 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-208ENST00000489611 MYH1P12882 1939 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 CCDC194A0A1B0GVG4 234 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 VWA3AA6NCI4 1184 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 PRR29P0C7W0 189 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 SPATA1Q5VX52 437 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 TMEM47Q9BQJ4 181 aa16.98■□□□□ 0.31
COL9A1-208ENST00000489611 PLIN4Q96Q06 1357 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 M0R2N6 131 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 PRPHP41219 470 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 NOVP48745 357 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 CDK8P49336 464 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 EVX2Q03828 476 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 USP49Q70CQ1 688 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 EYA3Q99504 573 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 TMX1Q9H3N1 280 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 FLT1P17948 1338 aa16.97■□□□□ 0.31
COL9A1-208ENST00000489611 RIMBP2O15034 1052 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms