RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 MAP4K1Q92918 833 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 APBA2Q99767 749 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 PAK6Q9NQU5 681 aaPredicted RBP12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 SYNPO2Q9UMS6 1093 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
SCAMP4-208ENST00000489554 RPTORQ8N122 1335 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 SLC15A5A6NIM6 579 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 ZKSCAN1P17029 563 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 PTPREP23469 700 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 WDR78Q5VTH9 848 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 SHCBP1Q8NEM2 672 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 TRIB2Q92519 343 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 DEFB118Q96PH6 123 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 SPATC1LQ9H0A9 340 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.49□□□□□ -0.414e-6■■■□□ 15.2
SCAMP4-208ENST00000489554 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
SCAMP4-208ENST00000489554 PLIN4Q96Q06 1357 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 TNRC18O15417 2968 aaPredicted RBP12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 EPB41L2O43491 1005 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 STRNO43815 780 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 RAD21O60216 631 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 PRDM1O75626 825 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 GRB14Q14449 540 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 ALX1Q15699 326 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 ATG4CQ96DT6 458 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 MOV10L1Q9BXT6 1211 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 MTMR4Q9NYA4 1195 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 TAF6LQ9Y6J9 622 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 DOCK3Q8IZD9 2030 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 BRCA2P51587 3418 aa12.48□□□□□ -0.41
SCAMP4-208ENST00000489554 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 ZMYM6O95789 1325 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 PLXNB2O15031 1838 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 F5H6K3 240 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 REC8O95072 547 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 TTLL1O95922 423 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 TFRCP02786 760 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 HOXC6P09630 235 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 KLRC3Q07444 240 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 PLS1Q14651 629 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 UBE2Q1Q7Z7E8 422 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 KCNB2Q92953 911 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 MKL1Q969V6 931 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 IL17RAQ96F46 866 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 CEP95Q96GE4 821 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 TBC1D32Q96NH3 1257 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 MROH8Q9H579 483 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 ANAPC4Q9UJX5 808 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 ADAMTS5Q9UNA0 930 aa12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 RBM8AQ9Y5S9 174 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-208ENST00000489554 A0A0G2JMZ2 1700 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 SLC25A27O95847 323 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 NDUFB10O96000 172 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 FGAP02671 866 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 ERCC3P19447 782 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 HSPA4P34932 840 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 RBM25P49756 843 aaKnown RBP12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 TFAP4Q01664 338 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 TRIM32Q13049 653 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 ABRAQ8N0Z2 381 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 ANKLE1Q8NAG6 615 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 GMCL1P1Q8NEA9 526 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 KIF2CQ99661 725 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 HTATIP2Q9BUP3 242 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
SCAMP4-208ENST00000489554 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 VWA5AO00534 786 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 EIF5BO60841 1220 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 COPB2P35606 906 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 CACNB2Q08289 660 aaPredicted RBP12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 TMEM132BQ14DG7 1078 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 CCL14Q16627 93 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 DPP9Q86TI2 863 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms