RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ATG4CQ96DT6 458 aa20.46■□□□□ 0.87
MDC1-206ENST00000489540 ESYT1Q9BSJ8 1104 aa20.46■□□□□ 0.87
MDC1-206ENST00000489540 KRT23Q9C075 422 aa20.46■□□□□ 0.87
MDC1-206ENST00000489540 PPP1R9AQ9ULJ8 1098 aa20.46■□□□□ 0.87
MDC1-206ENST00000489540 GABRQQ9UN88 632 aa20.46■□□□□ 0.87
MDC1-206ENST00000489540 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
MDC1-206ENST00000489540 GMCL1Q96IK5 515 aa20.45■□□□□ 0.86
MDC1-206ENST00000489540 NUP88Q99567 741 aaPredicted RBP20.45■□□□□ 0.86
MDC1-206ENST00000489540 SLF1Q9BQI6 1058 aa20.45■□□□□ 0.86
MDC1-206ENST00000489540 PORCNQ9H237 461 aa20.45■□□□□ 0.86
MDC1-206ENST00000489540 CWC22Q9HCG8 908 aaKnown RBP20.45■□□□□ 0.86
MDC1-206ENST00000489540 FEM1BQ9UK73 627 aa20.45■□□□□ 0.86
MDC1-206ENST00000489540 GJD2Q9UKL4 321 aa20.45■□□□□ 0.86
MDC1-206ENST00000489540 GREB1LQ9C091 1923 aaPredicted RBP20.45■□□□□ 0.86
MDC1-206ENST00000489540 NEDD4P46934 1319 aa20.45■□□□□ 0.86
MDC1-206ENST00000489540 TOP1P11387 765 aaKnown RBP20.44■□□□□ 0.86
MDC1-206ENST00000489540 BMP3P12645 472 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 GRK4P32298 578 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 SLC1A4P43007 532 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 SAMD1Q6SPF0 538 aaPredicted RBP20.44■□□□□ 0.86
MDC1-206ENST00000489540 PLEKHH3Q7Z736 793 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 IQCA1Q86XH1 822 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 PRPF38AQ8NAV1 312 aaKnown RBP20.44■□□□□ 0.86
MDC1-206ENST00000489540 SPATC1LQ9H0A9 340 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 FBXO28Q9NVF7 368 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 VWA5AO00534 786 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 KDM4AO75164 1064 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 CDC45O75419 566 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 TRDNQ13061 729 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 GPR142Q7Z601 462 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 DGKHQ86XP1 1220 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 SLAIN1Q8ND83 568 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 PXYLP1Q8TE99 480 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 NUDT12Q9BQG2 462 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 ZSWIM5Q9P217 1185 aa20.44■□□□□ 0.86
MDC1-206ENST00000489540 B4E1Z4 1266 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 ADCY3O60266 1144 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 CYP21A2P08686 494 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 MCCP23508 829 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 SHCBP1Q8NEM2 672 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 SOCS4Q8WXH5 440 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 ZNF333Q96JL9 665 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 TMEM47Q9BQJ4 181 aa20.43■□□□□ 0.86
MDC1-206ENST00000489540 MOV10L1Q9BXT6 1211 aaKnown RBP20.43■□□□□ 0.86
MDC1-206ENST00000489540 PLS1Q14651 629 aa20.42■□□□□ 0.86
MDC1-206ENST00000489540 TMEM132BQ14DG7 1078 aa20.42■□□□□ 0.86
MDC1-206ENST00000489540 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
MDC1-206ENST00000489540 SH3TC2Q8TF17 1288 aa20.42■□□□□ 0.86
MDC1-206ENST00000489540 CHURC1Q8WUH1 139 aa20.42■□□□□ 0.86
MDC1-206ENST00000489540 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
MDC1-206ENST00000489540 RBM8AQ9Y5S9 174 aaKnown RBP20.42■□□□□ 0.86
MDC1-206ENST00000489540 PLA2G6O60733 806 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 ZBED4O75132 1171 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 SLC25A27O95847 323 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 WDR78Q5VTH9 848 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 FAM160B2Q86V87 743 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 DCAF4Q8WV16 495 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 ANKS1AQ92625 1134 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 KIFC2Q96AC6 838 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 ZSCAN10Q96SZ4 725 aaPredicted RBP20.41■□□□□ 0.86
MDC1-206ENST00000489540 MROH8Q9H579 483 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 BIN2Q9UBW5 565 aaPredicted RBP20.41■□□□□ 0.86
MDC1-206ENST00000489540 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
MDC1-206ENST00000489540 CTDP1Q9Y5B0 961 aaPredicted RBP20.41■□□□□ 0.86
MDC1-206ENST00000489540 IVNS1ABPQ9Y6Y0 642 aa20.41■□□□□ 0.86
MDC1-206ENST00000489540 SLC15A5A6NIM6 579 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 TMEM232C9JQI7 657 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 STRNO43815 780 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 FDX1P10109 184 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 XRCC5P13010 732 aaKnown RBP20.4■□□□□ 0.86
MDC1-206ENST00000489540 ERCC3P19447 782 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 PTPREP23469 700 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 STAT3P40763 770 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 STAT2P52630 851 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 UBXN2AP68543 259 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 MORN1Q5T089 497 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 ZKSCAN3Q9BRR0 538 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 ANO2Q9NQ90 1003 aa20.4■□□□□ 0.86
MDC1-206ENST00000489540 COPB2P35606 906 aa20.39■□□□□ 0.85
MDC1-206ENST00000489540 RGS2P41220 211 aa20.39■□□□□ 0.85
MDC1-206ENST00000489540 RIOX2Q8IUF8 465 aa20.39■□□□□ 0.85
MDC1-206ENST00000489540 TRMT44Q8IYL2 757 aaKnown RBP20.39■□□□□ 0.85
MDC1-206ENST00000489540 REPS2Q8NFH8 660 aa20.39■□□□□ 0.85
MDC1-206ENST00000489540 USP6NLQ92738 828 aa20.39■□□□□ 0.85
MDC1-206ENST00000489540 UBAC1Q9BSL1 405 aa20.39■□□□□ 0.85
MDC1-206ENST00000489540 TMEM106CQ9BVX2 250 aa20.39■□□□□ 0.85
MDC1-206ENST00000489540 E7EWF7 191 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 ATP2A1O14983 1001 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 IKQ13123 557 aaPredicted RBP20.38■□□□□ 0.85
MDC1-206ENST00000489540 MAP2K5Q13163 448 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 KCTD1Q719H9 257 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 RALYLQ86SE5 291 aaKnown RBP20.38■□□□□ 0.85
MDC1-206ENST00000489540 NCAPG2Q86XI2 1143 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 NCOA7Q8NI08 942 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 SLC38A10Q9HBR0 1119 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 ZNF214Q9UL59 606 aaPredicted RBP20.38■□□□□ 0.85
MDC1-206ENST00000489540 MTMR7Q9Y216 660 aa20.38■□□□□ 0.85
MDC1-206ENST00000489540 ELNP15502 786 aa20.37■□□□□ 0.85
MDC1-206ENST00000489540 CYP2B6P20813 491 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms