RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 SH3TC2Q8TF17 1288 aa14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 GTF3C2Q8WUA4 911 aaPredicted RBP14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 MKL1Q969V6 931 aa14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 ANO2Q9NQ90 1003 aa14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 RABGAP1Q9Y3P9 1069 aa14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 FLT3LGP49771 235 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 SOX10P56693 466 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 PLS1Q14651 629 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 IFFO2Q5TF58 517 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 WDR78Q5VTH9 848 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 RCSD1Q6JBY9 416 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 LBX2Q6XYB7 198 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 GMCL1P1Q8NEA9 526 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 ESR2Q92731 530 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 MAP4K1Q92918 833 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 TMEM47Q9BQJ4 181 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 PPP1R9AQ9ULJ8 1098 aa14.47□□□□□ -0.09
SMARCD3-213ENST00000489503 PCP11498 1178 aaKnown RBP14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 ELNP15502 786 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 MCCP23508 829 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 NOVP48745 357 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 CCDC96Q2M329 555 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 SLC9C1Q4G0N8 1177 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 KIAA1211Q6ZU35 1233 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 KCTD1Q719H9 257 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 CYB5R4Q7L1T6 521 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 RAET1EQ8TD07 263 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 COA7Q96BR5 231 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 SLF1Q9BQI6 1058 aa14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 MOV10L1Q9BXT6 1211 aaKnown RBP14.46□□□□□ -0.09
SMARCD3-213ENST00000489503 FRMPD2Q68DX3 1309 aaPredicted RBP14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 GNRH1P01148 92 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 TOP1P11387 765 aaKnown RBP14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 BMP3P12645 472 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 HOXD10P28358 340 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 COL9A3Q14050 684 aaPredicted RBP14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 TMEM132BQ14DG7 1078 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 GPR142Q7Z601 462 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 CCAR1Q8IX12 1150 aaKnown RBP14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 KIFC2Q96AC6 838 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 SPATC1LQ9H0A9 340 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 CWC22Q9HCG8 908 aaKnown RBP14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 TCP11L1Q9NUJ3 509 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 HOXC10Q9NYD6 342 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 ZSWIM5Q9P217 1185 aa14.45□□□□□ -0.1
SMARCD3-213ENST00000489503 TNKSO95271 1327 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 TMEM232C9JQI7 657 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 E7EWF7 191 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 VWA5AO00534 786 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 SLC27A2O14975 620 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 TAL1P17542 331 aaPredicted RBP14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 MAPK4P31152 587 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 SLC1A4P43007 532 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 PRMT2P55345 433 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 SNAP25P60880 206 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 PPP4R3BQ5MIZ7 849 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 ENAHQ8N8S7 591 aaPredicted RBP14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 REPS2Q8NFH8 660 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 GMCL1Q96IK5 515 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 KRT23Q9C075 422 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 GJD2Q9UKL4 321 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 SYNPO2Q9UMS6 1093 aa14.44□□□□□ -0.1
SMARCD3-213ENST00000489503 ADCY3O60266 1144 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 ERCC3P19447 782 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 CYP2B6P20813 491 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 SLC4A3P48751 1232 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 CCNA1P78396 465 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 IKQ13123 557 aaPredicted RBP14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 CREB3L3Q68CJ9 461 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 TTBK2Q6IQ55 1244 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 CASC1Q6TDU7 716 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 CHST3Q7LGC8 479 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 PLEKHH3Q7Z736 793 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 MB21D1Q8N884 522 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 ARMC5Q96C12 935 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 ZNF333Q96JL9 665 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 ZSCAN10Q96SZ4 725 aaPredicted RBP14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 CNNM2Q9H8M5 875 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 ZNF214Q9UL59 606 aaPredicted RBP14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 ADAMTS5Q9UNA0 930 aa14.43□□□□□ -0.1
SMARCD3-213ENST00000489503 GRK4P32298 578 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 SLC16A2P36021 539 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 ANTXR2P58335 489 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 MTFR1Q15390 333 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 RALYLQ86SE5 291 aaKnown RBP14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 NCAPG2Q86XI2 1143 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 CPXCR1Q8N123 301 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 DCAF4Q8WV16 495 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 UBAC1Q9BSL1 405 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 SENP2Q9HC62 589 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 RAVER2Q9HCJ3 691 aaKnown RBP14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 FEM1BQ9UK73 627 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 ZNF236Q9UL36 1845 aa14.42□□□□□ -0.1
SMARCD3-213ENST00000489503 GOLGA8HP0CJ92 632 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 PDHBP11177 359 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 STAT2P52630 851 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 TRIM32Q13049 653 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms