RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CCL23P55773 120 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 CCSAPQ6IQ19 270 aaPredicted RBP18.63■□□□□ 0.57
UFD1-209ENST00000489406 MAPKAPK5Q8IW41 473 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 ACER1Q8TDN7 264 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 NSUN4Q96CB9 384 aaKnown RBP18.63■□□□□ 0.57
UFD1-209ENST00000489406 KIAA1683Q9H0B3 1180 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 PALD1Q9ULE6 856 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 SPTBN4Q9H254 2564 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 ZBTB22O15209 634 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 IL9P15248 144 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
UFD1-209ENST00000489406 GRB10Q13322 594 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 PLS1Q14651 629 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
UFD1-209ENST00000489406 HFE2Q6ZVN8 426 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 ABRAQ8N0Z2 381 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 MROH8Q9H579 483 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 PDS5AQ29RF7 1337 aaKnown RBP18.62■□□□□ 0.57
UFD1-209ENST00000489406 ROBO3Q96MS0 1386 aa18.62■□□□□ 0.57
UFD1-209ENST00000489406 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
UFD1-209ENST00000489406 A0A0U1RQG5 324 aaPredicted RBP18.61■□□□□ 0.57
UFD1-209ENST00000489406 FCER1AP12319 257 aa18.61■□□□□ 0.57
UFD1-209ENST00000489406 EXOSC9Q06265 439 aaKnown RBP18.61■□□□□ 0.57
UFD1-209ENST00000489406 COG2Q14746 738 aa18.61■□□□□ 0.57
UFD1-209ENST00000489406 RAB3GAP1Q15042 981 aa18.61■□□□□ 0.57
UFD1-209ENST00000489406 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
UFD1-209ENST00000489406 HIPK3Q9H422 1215 aa18.61■□□□□ 0.57
UFD1-209ENST00000489406 HOXC10Q9NYD6 342 aa18.61■□□□□ 0.57
UFD1-209ENST00000489406 POTEB3A0JP26 581 aa18.6■□□□□ 0.57
UFD1-209ENST00000489406 PGK2P07205 417 aa18.6■□□□□ 0.57
UFD1-209ENST00000489406 ASGR1P07306 291 aa18.6■□□□□ 0.57
UFD1-209ENST00000489406 POTEBQ6S5H4 581 aa18.6■□□□□ 0.57
UFD1-209ENST00000489406 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
UFD1-209ENST00000489406 TGFBRAP1Q8WUH2 860 aa18.6■□□□□ 0.57
UFD1-209ENST00000489406 UBE2ZQ9H832 354 aaPredicted RBP18.6■□□□□ 0.57
UFD1-209ENST00000489406 RAI14Q9P0K7 980 aa18.6■□□□□ 0.57
UFD1-209ENST00000489406 ARHGEF15O94989 841 aa18.59■□□□□ 0.57
UFD1-209ENST00000489406 CD4P01730 458 aa18.59■□□□□ 0.57
UFD1-209ENST00000489406 TAP1Q03518 808 aa18.59■□□□□ 0.57
UFD1-209ENST00000489406 RPUSD2Q8IZ73 545 aaKnown RBP18.59■□□□□ 0.57
UFD1-209ENST00000489406 PRSS33Q8NF86 280 aa18.59■□□□□ 0.57
UFD1-209ENST00000489406 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.59■□□□□ 0.57
UFD1-209ENST00000489406 MFSD14AQ96MC6 490 aa18.59■□□□□ 0.57
UFD1-209ENST00000489406 NOL10Q9BSC4 688 aaKnown RBP18.59■□□□□ 0.57
UFD1-209ENST00000489406 SAP30BPQ9UHR5 308 aaKnown RBP18.59■□□□□ 0.57
UFD1-209ENST00000489406 ZFHX2Q9C0A1 2572 aaPredicted RBP18.58■□□□□ 0.57
UFD1-209ENST00000489406 FLT1P17948 1338 aa18.58■□□□□ 0.57
UFD1-209ENST00000489406 GFRA3O60609 400 aa18.58■□□□□ 0.56
UFD1-209ENST00000489406 LPXNO60711 386 aa18.58■□□□□ 0.56
UFD1-209ENST00000489406 C6orf222P0C671 652 aaPredicted RBP18.58■□□□□ 0.56
UFD1-209ENST00000489406 TIMM10P62072 90 aa18.58■□□□□ 0.56
UFD1-209ENST00000489406 LEXMQ3ZCV2 418 aa18.58■□□□□ 0.56
UFD1-209ENST00000489406 PCSK9Q8NBP7 692 aaKnown RBP18.58■□□□□ 0.56
UFD1-209ENST00000489406 AATFQ9NY61 560 aaKnown RBP eCLIP18.58■□□□□ 0.56
UFD1-209ENST00000489406 FAM184BQ9ULE4 1060 aa18.58■□□□□ 0.56
UFD1-209ENST00000489406 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.56
UFD1-209ENST00000489406 ZNFX1Q9P2E3 1918 aaKnown RBP18.57■□□□□ 0.56
UFD1-209ENST00000489406 KCNA5P22460 613 aa18.57■□□□□ 0.56
UFD1-209ENST00000489406 TTLL4Q14679 1199 aa18.57■□□□□ 0.56
UFD1-209ENST00000489406 TANGO6Q9C0B7 1094 aa18.57■□□□□ 0.56
UFD1-209ENST00000489406 WNT8AQ9H1J5 351 aa18.57■□□□□ 0.56
UFD1-209ENST00000489406 IL16Q14005 1332 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.56■□□□□ 0.56
UFD1-209ENST00000489406 CIAO1O76071 339 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 PTPN5P54829 565 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 ZNF792Q3KQV3 632 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 PTCRAQ6ISU1 281 aaPredicted RBP18.56■□□□□ 0.56
UFD1-209ENST00000489406 PI16Q6UXB8 463 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 SPRED2Q7Z698 418 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 VWCEQ96DN2 955 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 MMP19Q99542 508 aa18.56■□□□□ 0.56
UFD1-209ENST00000489406 CST5P28325 142 aaPredicted RBP18.55■□□□□ 0.56
UFD1-209ENST00000489406 CCDC27Q2M243 656 aa18.55■□□□□ 0.56
UFD1-209ENST00000489406 SCLYQ96I15 445 aa18.55■□□□□ 0.56
UFD1-209ENST00000489406 HMG20BQ9P0W2 317 aa18.55■□□□□ 0.56
UFD1-209ENST00000489406 CDK5RAP2Q96SN8 1893 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 ZNF536O15090 1300 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 DUSP11O75319 330 aaKnown RBP18.54■□□□□ 0.56
UFD1-209ENST00000489406 BAG3O95817 575 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 GNASQ5JWF2 1037 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 IER5LQ5T953 404 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 TATDN1Q6P1N9 297 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 MB21D1Q8N884 522 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 NOC4LQ9BVI4 516 aaKnown RBP18.54■□□□□ 0.56
UFD1-209ENST00000489406 USP44Q9H0E7 712 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 FBXO3Q9UK99 471 aa18.54■□□□□ 0.56
UFD1-209ENST00000489406 ZHX1Q9UKY1 873 aaPredicted RBP18.54■□□□□ 0.56
UFD1-209ENST00000489406 DIS3Q9Y2L1 958 aaKnown RBP18.54■□□□□ 0.56
UFD1-209ENST00000489406 GRXCR2A6NFK2 248 aa18.53■□□□□ 0.56
UFD1-209ENST00000489406 DSG3P32926 999 aa18.53■□□□□ 0.56
UFD1-209ENST00000489406 IL15P40933 162 aaPredicted RBP18.53■□□□□ 0.56
UFD1-209ENST00000489406 KCTD2Q14681 263 aa18.53■□□□□ 0.56
UFD1-209ENST00000489406 ABCB5Q2M3G0 1257 aa18.53■□□□□ 0.56
UFD1-209ENST00000489406 ATG4CQ96DT6 458 aa18.53■□□□□ 0.56
UFD1-209ENST00000489406 XAGE2Q96GT9 111 aa18.53■□□□□ 0.56
UFD1-209ENST00000489406 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
UFD1-209ENST00000489406 PLCG2P16885 1265 aa18.52■□□□□ 0.56
UFD1-209ENST00000489406 CERKLQ49MI3 558 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms