RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FAM86C2PA6NEL3 165 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 COBLO75128 1261 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 ADORA2AP29274 412 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 FAAP100Q0VG06 881 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 TMEM240Q5SV17 173 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 RASIP1Q5U651 963 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 DPP9Q86TI2 863 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 TEX11Q8IYF3 940 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 SH3RF3Q8TEJ3 882 aaPredicted RBP11.37□□□□□ -0.59
SSBP1-212ENST00000489378 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 PRRC2BQ5JSZ5 2229 aaKnown RBP11.37□□□□□ -0.59
SSBP1-212ENST00000489378 GBF1Q92538 1859 aa11.37□□□□□ -0.59
SSBP1-212ENST00000489378 ZNF236Q9UL36 1845 aa11.36□□□□□ -0.59
SSBP1-212ENST00000489378 A0A1W2PQ45 241 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-212ENST00000489378 A0A1W2PQY0 241 aa11.36□□□□□ -0.59
SSBP1-212ENST00000489378 CIAO1O76071 339 aa11.36□□□□□ -0.59
SSBP1-212ENST00000489378 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-212ENST00000489378 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-212ENST00000489378 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
SSBP1-212ENST00000489378 MICALL1Q8N3F8 863 aa11.36□□□□□ -0.59
SSBP1-212ENST00000489378 NSUN4Q96CB9 384 aaKnown RBP11.36□□□□□ -0.59
SSBP1-212ENST00000489378 C12orf42Q96LP6 360 aa11.36□□□□□ -0.59
SSBP1-212ENST00000489378 NKX2-4Q9H2Z4 354 aa11.36□□□□□ -0.59
SSBP1-212ENST00000489378 PRKRIP1Q9H875 184 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-212ENST00000489378 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
SSBP1-212ENST00000489378 PGK1P00558 417 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 TIMP1P01033 207 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 TIMM10P62072 90 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 LBX2Q6XYB7 198 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 TBC1D9Q6ZT07 1266 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 METTL16Q86W50 562 aaKnown RBP11.35□□□□□ -0.59
SSBP1-212ENST00000489378 XPNPEP3Q9NQH7 507 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 GINM1Q9NU53 330 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 GH2P01242 217 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 LDHCP07864 332 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 ACRP10323 421 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 VCAM1P19320 739 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 GSTO1P78417 241 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 PI16Q6UXB8 463 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 FOXP4Q8IVH2 680 aaPredicted RBP11.35□□□□□ -0.59
SSBP1-212ENST00000489378 MAPKAPK5Q8IW41 473 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 FEZ1Q99689 392 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 MOV10L1Q9BXT6 1211 aaKnown RBP11.35□□□□□ -0.59
SSBP1-212ENST00000489378 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
SSBP1-212ENST00000489378 TBX21Q9UL17 535 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 PALD1Q9ULE6 856 aa11.35□□□□□ -0.59
SSBP1-212ENST00000489378 YBX2Q9Y2T7 364 aaKnown RBP11.35□□□□□ -0.59
SSBP1-212ENST00000489378 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 DCDC2CA8MYV0 355 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 ERC2O15083 957 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 GPR37L1O60883 481 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 CSF2RAP15509 400 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 MRE11P49959 708 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 PPIGQ13427 754 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSBP1-212ENST00000489378 SKIV2LQ15477 1246 aaKnown RBP11.34□□□□□ -0.59
SSBP1-212ENST00000489378 RAB30Q15771 203 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 AAK1Q2M2I8 961 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 MFSD5Q6N075 450 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
SSBP1-212ENST00000489378 LENG1Q96BZ8 264 aaPredicted RBP11.34□□□□□ -0.59
SSBP1-212ENST00000489378 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 HMG20BQ9P0W2 317 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 MSRAQ9UJ68 235 aa11.34□□□□□ -0.59
SSBP1-212ENST00000489378 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
SSBP1-212ENST00000489378 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
SSBP1-212ENST00000489378 TRANK1O15050 2925 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 LRRC37A2A6NM11 1700 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 STRNO43815 780 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 RARBP10826 455 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 ERCC3P19447 782 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 IL15P40933 162 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-212ENST00000489378 RNF180Q86T96 592 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 WDR63Q8IWG1 891 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 ACER1Q8TDN7 264 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 TGFBRAP1Q8WUH2 860 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 XAGE2Q96GT9 111 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 MAML3Q96JK9 1138 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 SLC28A3Q9HAS3 691 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 RAI14Q9P0K7 980 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 SAP30BPQ9UHR5 308 aaKnown RBP11.33□□□□□ -0.6
SSBP1-212ENST00000489378 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
SSBP1-212ENST00000489378 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
SSBP1-212ENST00000489378 FLT1P17948 1338 aa11.32□□□□□ -0.6
SSBP1-212ENST00000489378 ZNFX1Q9P2E3 1918 aaKnown RBP11.32□□□□□ -0.6
SSBP1-212ENST00000489378 TLL1O43897 1013 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms